Nicotiana attenuata (coyote tobacco): 109241242
Help
Entry
109241242 CDS
T05870
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109241242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109241242
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109241242
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
109241242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINGv
zf-ANAPC11
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
109241242
NCBI-ProteinID:
XP_019263509
UniProt:
A0A314L6B6
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MEFATAVPASSNGAEGIAPAERSSSVDAINSSSSLSSSSGSVALSPAQVTGKDSNSMATS
RYDDDEEEEDVCRICRNPGEADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKH
AFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLIIIPFITFWIWRL
AFVRSFGEAQRLFLGHLSTTIILTDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGQE
ADREDDGDRNAARAPRRPAVPANRNFADGNGEDANGVQGIAGAGQIIRRNAENVAARWEM
QAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIF
VPFSLGRIILYYLSWLLSSASNPVLSTVMPLAETALSLANITLDSAWTAVANLTPANEES
SLLGQATEMLKANATGLTEPANNLSTTVSADLLKGSAVGTSRLSDVTTLAVGYMFIFSLV
FFYLGIVALIRYTRGEPLTLGRFYGIASIAETIPSLFRQFVAAMRHLMTMIKVAFLLVIE
LGVFPLMCGWWLDVCTIRMFGKSITQRVEFFSVSPLASSLVHWVVGIVYMLQISIFVSLL
RGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVYLPVKLA
MRMAPSIFPLDISVSDPFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVGWAL
GLTDFLLPRPEDNGGQENGNGDQGRVEWFQAAHGVPDRALAGFAPDNRARHAAANTNFVE
DYDTDEQADTDRYAFVLRIVLLLVVAWMTLLLFNSALIIVPISLGRALFNSLPLLPITHG
IKCNDLYAFVIGSYAIWTAIAGVRYSIDQIRTRRVTVLMNQILKWCAIVLKSSALLSIWI
LIIPVLIGLLFELLVIVPMRVPIDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDE
SWRLKFERVRENGFSRLQGFWVLREIVLPIIMKLLTALCVPYVLAKGVFPIFGYPLLVNS
AVYRFAWLGCLGFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEEVERRQNEVE
LSREGEIPIVHEDVQEVADVGLRHRHGVTQDA
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgcaacggcggttccggcgtctagtaacggcgccgagggaattgctccggcg
gaacgctcctcctccgttgatgcgatcaattcgtcttcatccctgtcttcttcctcgggt
tcagttgcgttgtctccggcgcaggtgactggtaaggattccaattctatggctacgagc
aggtatgatgacgacgaagaagaagaggacgtttgtcggatctgtcgaaaccctggcgag
gccgataatcccctgcggtatccttgtgcttgcagtggtagcataaagtttgttcaccag
gattgcttacttcaatggcttaatcacagtaacgctcgccaatgcgaggtatgcaaacat
gcattctcgttttcgccagtttatgctgagaatgctccggctaggctcccttttcaagag
tttgtggttgggatggcaatgaaagcctgccatgtcctgcaattcttcctgcgtcttagc
tttgtgctttctgtatggctcatcataatacctttcattacattctggatatggcggttg
gcttttgttagaagttttggagaagcacagagactcttcttgggtcacttatccacaacc
attattcttaccgactgtctccatgggtttctgctctctgctagcattgttttcatcttt
cttggggcaacttcattaagggattacttcaggcatttgcgcgaacttgggggacaggaa
gctgacagggaagatgatggggacagaaatgctgcccgtgctccaagaagacctgctgtt
ccagctaacagaaattttgctgatggaaacggggaagatgctaatggtgtacaggggatt
gctggagctggccagataatccggagaaatgcagaaaatgttgcggcccgttgggagatg
caggcagcaaggcttgaagctcatgtcgaacagatgtttgatggtttggatgatgctgat
ggggcagaggatgtcccttttgatgagcttgtaggcatgcagggtcctgtgtttcatctc
gttgaaaatgcatttactgttcttgcgagtaatatgatatttcttggagtggtgatcttt
gttcccttttcattaggacgaattatactctattatttgtcttggcttttgtcctctgca
agcaatccagtattgtccactgttatgccacttgctgaaacagcactttccttggccaat
attactctggatagtgcgtggactgctgttgcaaacttaactcctgctaacgaagagagc
agtttgcttggtcaagccacagaaatgttaaaagcaaatgccactggattgactgagccg
gcaaacaacctcagtacaacagtgtctgctgatcttttgaaagggtcagctgttggaaca
tcccggctgtctgatgttacaactcttgccgttggctacatgtttatattttctctggtc
ttcttttacctcgggatagttgctttaatccggtacaccaggggagagcctttgacgttg
gggagattctatggtattgcttccattgcagaaaccattccctctctctttagacaattt
gtagcagctatgaggcatctgatgactatgattaaggttgctttcctccttgtcattgaa
cttggggttttccctttgatgtgtggatggtggctggatgtttgcaccattagaatgttt
gggaagtcgatcacgcaaagagtggaattcttttcagtatctccattggcaagctcatta
gttcattgggttgtagggattgtttacatgctacaaataagtatctttgttagccttctt
cgaggggtcctgcgtaatggagtgctttactttcttcgagatccggcagaccccaattac
aacccattccgggatttgatcgatgatcctgtacataagcatgctcgtcgagttcttttg
tcagttgcagtctatggaagcttaatagtgatgctcgtgtatctgcctgtcaaacttgcc
atgcgaatggctccatccattttcccactagatatctctgtatctgatccatttactgaa
atacctgccgacatgcttctcttccaaatctgtattccctttgcaattgagcattttaag
ctgcgtacaacaatcaagtctctgctccgctattggtttactgcagtgggctgggctctt
ggtcttactgatttcttacttccccgacctgaggataatggtggacaagagaatgggaac
ggcgaccaaggaagggtggagtggtttcaagccgcacatggtgtaccagatcgggccttg
gcagggtttgctcctgataacagagctaggcatgcagcagctaatactaactttgtggaa
gactatgacactgacgagcaagcggataccgacaggtacgcctttgtgctccgtatcgtg
ctgttgttggtagtggcttggatgactctcctcctctttaattctgccctcataattgta
ccgatttcacttggacgtgcgctcttcaattccctcccactgcttccaattacacatgga
atcaagtgcaatgatttgtatgcatttgtaattggaagttatgccatatggactgcgatt
gctggagtgaggtattcaattgatcaaattaggactaggagagttacagttttgatgaac
caaattttgaaatggtgcgccattgttctgaagagttctgcactattgtcaatatggatt
cttatcatccctgtgttaattgggctgctttttgaacttctggtcattgtgccaatgcga
gttcccattgacgaaagcccagtcttccttctttatcaggattgggctttaggactaatc
tttctaaagatctggacaaggctggttatgctagatcatatgatgccactggtggatgag
agctggcggctgaaatttgagagggtgagggaaaacggtttctctaggttgcaaggcttt
tgggtgcttcgggagattgtccttcctattatcatgaagctgcttacggcattgtgtgtt
ccatatgttttagccaaaggtgtattcccaatatttggttaccccttgcttgtcaactct
gccgtttaccgatttgcttggcttggctgccttggcttcagtctgttatgtttctgtgct
aagcgtttccacgtatggttcaccaatctccacaattctatacgtgatgaccgttatttg
attggccgtagacttcataattttggggaagaggtagagcggaggcaaaatgaagtagag
ttgtccagagagggagagattcctatagtgcatgaggatgtccaagaggttgctgatgta
ggactaagacacaggcatggcgtcacgcaagatgcttaa
DBGET
integrated database retrieval system
