Neisseria brasiliensis: GJV52_06395
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Entry
GJV52_06395 CDS
T06557
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nbl
Neisseria brasiliensis
Pathway
nbl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nbl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GJV52_06395 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbl03021
]
GJV52_06395 (rpoB)
03400 DNA repair and recombination proteins [BR:
nbl03400
]
GJV52_06395 (rpoB)
Enzymes [BR:
nbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GJV52_06395 (rpoB)
Transcription machinery [BR:
nbl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GJV52_06395 (rpoB)
DNA repair and recombination proteins [BR:
nbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GJV52_06395 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
SopD
Motif
Other DBs
NCBI-ProteinID:
QGL26457
UniProt:
A0A5Q3S2W5
LinkDB
All DBs
Position
1246151..1250329
Genome browser
AA seq
1392 aa
AA seq
DB search
MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENAFDQRTDDGLQAAFNSI
FPIVSHNGYARLEFVHYTLGDPLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTVKE
VRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDQLYFRIDRRRKMPVTILLKALGYNNEQILDTFYDKETFFLSKGG
VQTELIPGRLKGETAKNDIVDAEGNVLVTKGKRITAKNIRDIANAGLTRLDVDPETLLGK
VLAADLIVPDTGEVLAVANDEITEELLAKLDIHGIEQVTTLYINELDQGGYISSTLRTDE
TADQQAARVAIYRMMRPGEPPTEEAVEMLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKLS
EAQQGSWYGRLLNETFAGAAEKGGYVLSIEDIVASIATLVELRNGHGEVDDIDHLGNRRV
RSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLSQ
FMDQTNPLSEVTNKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN
SLSVYARTNDYGFLETPYRRVIDGKVTTEIDYLSAIEEGRYVIAQANAELDAEGNLTGDL
VTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCL
RPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNL
VKFTRSNQSTNINQRPAVKAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYE
DSILLSEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDDSGIVYI
GAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQV
FTREGIQRDKRAQSIIDSELKRYRQDLSDQLRIFDNDAFDRIERMIVGQKANGGPMKLAK
GSEITAEYLASTASKHDWFDIRLADEDLAKQLELIKLSLQQKREEADELYEVKKKKLTQG
DELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLN
PLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKASELREFLNKLYNNSGKQEDLD
SLSDDEIIELASNLRKGASFASPVFDGAKESEIRDMLNLAYPSDDPEVEKLGFNDTKTQI
TLYDGRSGEAFDRRVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
GEMEVWALEAYGAAYTLQEMLTVKSDDVTGRTKMYENIVKGEHKIDAGMPESFNVLVKEI
RSLGLDIDLERY
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaactattcgtttaccgagaaaaaacgtatccgtaagagttttgccaaacgagagaac
gtattggaagttccctttttgctggcaactcaaattgattcttatgcaaaatttctgcaa
ttagaaaatgctttcgaccagcgtactgatgatggtctgcaagcagcattcaattctatt
ttcccaatcgtcagccacaatggctatgcacgtttggaatttgtccattacaccttgggt
gatccgttgtttgatattcctgaatgtcaattgcgcggtattacttacgctgctcctttg
cgtgcacgcatccgcttggtgattttggataaagaggcttctaaaccgactgtaaaagaa
gtacgcgaaaacgaagtgtacatgggtgaaatcccattgatgacaccaagcggctctttt
gtcatcaatggtaccgagcgtgtgatcgtttctcagttgcaccgttctccgggtgtgttc
tttgagcatgaccgtggtaagacgcactcttcgggcaaattattgttctctgcccgcatt
attccttaccgtggttcatggttggattttgagtttgatccaaaagatcaactgtatttc
cgtatcgaccgtcgccgtaaaatgccggttaccattttgttgaaagccttgggttacaac
aatgaacagattttggacactttctacgacaaagaaacattcttcttgtcaaaaggtggt
gtgcaaactgaattgattccaggccgtctgaaaggtgaaaccgctaaaaacgacatcgtg
gatgctgaaggcaacgttttggtgaccaaaggcaaacgcatcactgctaaaaatatccgt
gatattgccaatgccggtttgacccgattggacgttgatcctgaaaccttattgggcaaa
gtcttggctgctgatttgatcgtgccggacactggtgaagtattggctgtggccaatgat
gaaatcaccgaagaattgttggcgaaactggatatccacggtattgagcaagttactact
ttgtacatcaatgaattggaccaaggtggttacatttccagcaccttgcgtacggatgaa
actgccgaccagcaagctgcccgcgtagcgatttaccgcatgatgcgtccgggcgaaccg
cctaccgaagaagctgttgaaatgctcttcaaccgcttgttcttcagtgaagacagctac
gacttgtctcgtgtaggccgtatgaaattcaatacccgcacctacgagcaaaaattgtct
gaagcgcaacaaggctcttggtatggtcgtttattgaacgaaacctttgccggtgcagcc
gaaaaaggtggctatgtactgagcattgaagacattgtcgcttcgattgccactttggtt
gaattgcgtaacggtcacggcgaagtggacgatatcgaccacttgggcaaccgtcgcgtg
cgttcggttggtgagttgactgaaaaccaattccgcagtggcttggctcgtgttgagcgc
gcagtgaaagagcgtttgaaccaagcagaatctgaaaacctgatgccgcatgatttgatc
aatgctaaaccggtttctgctgccattaaagaattcttcggttcaagccaattgagccaa
tttatggatcaaaccaacccactgtctgaagtgacaaacaaacgtcgtgtttctgctttg
ggtccaggcggtttgacccgtgaacgtgctggctttgaagtgcgtgacgtacacccgact
cactatggccgcgtatgtccgattgaaacacccgaaggtccgaacattggtttgattaac
tcgctgtctgtttatgcgcgtaccaatgattatggtttcttggaaaccccataccgccgt
gtaattgacggtaaagtaaccacggaaatcgattacttgtctgccatcgaagaaggccgc
tatgtgattgcacaggccaatgccgaattggatgcagaaggcaatctgaccggtgatttg
gtgacctgtcgtgaaaaaggcgaaaccattatggccacacctgaccgcgttcaatacatg
gatgtggcaaccggccaagtggtatcggtagcggcttccctgattccgttcttggaacac
gatgacgcgaaccgtgccttgatgggtgccaacatgcaacgtcaagctgtgccttgtctg
cgtcctgaaaaaccaatggtcggtaccggtatcgaacgctcagtagccgttgactcggca
acggcgattgttgcccgtcgtggcggcgtggttgaatatgttgatgccaaccgtgtggtg
attcgcgtacacgatgacgaagcgactgccggtgaagtgggtgtggacatctacaatctg
gtcaaatttacccgctctaaccaatcaaccaacatcaaccaacgtccggctgtgaaagca
ggcgatgtgttgcaacgtggcgacttggtagccgacggtgcttcgactgacttgggcgaa
ttggcgctgggtcaaaacatgaccatcgccttcatgccttggaacggttacaactacgaa
gactcgattttgctgtctgaaaaagtggctgccgatgaccgctacacttcgattcacatt
gaagaattgaacgttgtggcgcgtgacactaagttgggtgccgaagacattacccgcgat
attccgaacttgtctgagcgcatgcaaaaccgtttggacgattccggtattgtgtacatc
ggtgctgaagtagaagccggtgacgtgttggtgggtaaagtaacccctaaaggcgaaacc
caattgacgcctgaagaaaaactgttgcgtgcgattttcggtgaaaaagcgtctgatgta
aaagacacttcattgcgtatgccgaccggcatgagcggtaccgtgattgacgtgcaagtg
tttacccgcgaaggtatccagcgcgacaaacgtgcccaatcgattattgattctgagttg
aaacgctaccgtcaagacttaagtgatcagctgcgtattttcgataacgatgcgtttgat
cgtatcgagcgcatgattgttggccaaaaagccaacggtggcccgatgaagttggctaaa
ggtagcgaaatcactgctgaatacttggcttctaccgccagcaaacacgattggttcgac
atccgtttggccgatgaagatttggccaaacaattagagctgattaagctgagcctgcag
caaaaacgcgaagaagcggatgagttgtatgaagtgaagaagaaaaagctgacccaaggc
gacgaattgcagccgggcgtacaaaaaatggtgaaagtattcatcgccatcaaacgccgt
ctgcaagccggtgacaaaatggccggccgccacggtaacaaaggtgtggtatcacgcatt
ctgccggtggaagacatgccttatatggcagacggccgtccagttgacatcgtgttgaac
ccattgggtgtaccatcgcgtatgaatatcggtcagattttggaagtgcacttgggttgg
gcggcaaaaggtatcggtgaacgcatcgaccgtatgctcaaagagcagcgcaaagccagc
gaattgcgtgaattcttgaataagctgtacaacaacagcggcaagcaagaagatctcgac
agcttgagcgatgatgaaatcatcgaattggcttctaacctgcgtaaaggtgcttctttc
gcttctccggtattcgacggtgcgaaagaatctgaaatccgcgacatgctgaacttggct
tatccaagcgatgatcctgaagtagaaaaattgggctttaacgacaccaaaacccaaatt
accctttacgatggccgttcaggcgaagctttcgaccgccgcgtaaccgtaggcgtgatg
cactacttgaaactgcatcacttggttgatgagaaaatgcacgcccgttcgaccggtcct
tacagcttggtgacccaacaacctctgggcggtaaagcgcagttcggtggccaacgtttc
ggtgagatggaagtttgggcgctggaagcttacggtgctgcttacaccctgcaagaaatg
ttgaccgtgaagtccgatgacgtgacaggtcgtaccaaaatgtatgaaaacattgttaaa
ggcgaacacaaaatcgacgccggtatgcctgaatccttcaacgtattggttaaagagatt
cgctcattgggcttggatatcgatttggaacgttattaa
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