Nocardioides sp. JS614: Noca_1351
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Entry
Noca_1351 CDS
T00443
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nca
Nocardioides sp. JS614
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nca03019
]
Noca_1351
03009 Ribosome biogenesis [BR:
nca03009
]
Noca_1351
Messenger RNA biogenesis [BR:
nca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Noca_1351
Ribosome biogenesis [BR:
nca03009
]
Eukaryotic type
Pre-60S particles
RNases
Noca_1351
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABL80865
UniProt:
A1SGD0
LinkDB
All DBs
Position
complement(1429063..1429731)
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AA seq
222 aa
AA seq
DB search
MNERLVWIDCEMTGLDLRADALIEVAALVTDFDLNVLGSGVDLIVKPPAEALDQMNEFVR
DMHEKSGLLRELDSGISLDEAEEQVLAYVKEFCPDGSRPPLAGNTVATDRAFLARDMPNL
ETFLHYRIVDVSSIKELSRRWYPRAYFQAPAKRGNHRALADIQESIEELRYYRDAVFVPS
PGPDSDAARAIALKHGGSLTGLSGDEAVETASGPGADSADQP
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaacgactcgtctggatcgactgcgagatgacgggcctggatctgcgggccgac
gcgctgatcgaggtggccgcgctggtcaccgacttcgacctcaacgtgctcgggagcggc
gtcgacctgatcgtcaagccacccgcggaggccctcgaccagatgaacgagttcgtccgg
gacatgcacgagaagtccgggctgctgcgcgagctggactccggcatctccctcgacgag
gctgaggagcaggtgctggcctacgtcaaggagttctgccccgacggcagccgcccgccg
ctggccggcaacaccgtggcgaccgaccgggcgttcctcgcccgggacatgccgaacctc
gagacgttccttcactaccggatcgtcgacgtgtcctcgatcaaggagctctcgcgccgg
tggtacccccgcgcgtacttccaggcgccggccaagcgcgggaaccaccgggcactcgcc
gacatccaggagagcatcgaggagctgcgctactaccgcgacgccgtgttcgtgccctcc
cccggccccgacagcgacgcggcgcgcgcgatcgcgctcaagcacggcggctcgctcacc
gggctctccggcgacgaggccgtggagaccgcgtccggcccgggggccgattctgcggat
cagccctag
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