KEGG   Notothenia coriiceps (black rockcod): 104942912
Entry
104942912         CDS       T04920                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03420  Nucleotide excision repair
ncc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104942912 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104942912 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncc04121]
    104942912 (ercc8)
   03400 DNA repair and recombination proteins [BR:ncc03400]
    104942912 (ercc8)
Ubiquitin system [BR:ncc04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104942912 (ercc8)
DNA repair and recombination proteins [BR:ncc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104942912 (ercc8)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Nup160
Other DBs
NCBI-GeneID: 104942912
NCBI-ProteinID: XP_010766528
UniProt: A0A6I9MT99
LinkDB
Position
Unknown
AA seq 401 aa
MLGFLTARQAGVDDPLRLRRAESTRRVLGLKLNPDRDVDRIHGNGINTIDIEAVEGRYML
SGGADGVIVIYDLENYSRKLQYTCKAVCTVGRSSRYVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFAFEGNVYSHHLSPIARKHSLIAVGTTDPKIQLCDLKSGSRIH
VLQGHRAEILSVRWSPRYDHILATASADSKVKVWDVRRASGSLFTLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTGDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVCNESRKRLQFTV
SRGCSPEFVFVPCGSSVAVYALHTGELVTMLRGHYNNVDCCEFHPDYQELYTGGKDCNIL
AWVPAPRAPDVEEESTTANQAAADQSSVNPAFQDAWSSDED
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgttggggtttcttactgccaggcaggctggtgtggatgatcctctgcgactgaggcgt
gcagagtcaacgcggagggtcctgggtctgaagttgaatcctgacagagatgttgataga
atccatggaaacggcatcaacaccattgacattgaagcagtagagggcagatacatgttg
tctggcggcgcagatggtgtgattgtcatctatgacctggagaactacagtaggaagcta
cagtacacctgcaaggcagtttgcactgtaggcaggtcgagtcggtatgtccacaaattc
agcgtagagacagtccagtggtatccttatgacacgggcatgtttgtctcgagttccttt
gacaagaccatgaaggtctgggacactgagacactgaagcctgccgaagtctttgcgttt
gagggcaatgtctacagccaccacctctcccccatcgccaggaagcacagtctcattgca
gttggcaccacagaccctaaaatccagctgtgtgacctgaagtctggttcacggattcat
gttcttcagggccacagagcagagatcctgtccgtgcggtggtcgccccgatacgatcac
atcttagccactgccagtgcagacagcaaagtgaaagtatgggatgtgcgtcgggcttct
ggtagcctcttcactctggaccaacacaatggagacaaatcaaaagcatcctctgaggca
gtgaacacggcgcataatggcagagtgaatggcctgtgcttcactggcgatggcctctac
ctcctcaccactggaactgatgaccgtatgcgactatggaatagtgcaactggggaaaac
accctggtaaattacgggaaggtctgcaacgagagccgtaaaaggcttcagtttacagtt
tcccgtggttgcagcccagagtttgtgtttgtgccctgcggcagctcggtggctgtgtat
gccctccacacaggagagctggtcaccatgctcagagggcactacaacaacgtggactgc
tgcgagtttcacccagactaccaggagctctatactggaggtaaagactgtaacatcctg
gcgtgggttcctgcccctcgtgccccagatgtggaagaagagtcaacaactgcaaatcag
gctgctgctgaccagtcctcagtgaacccggcctttcaggatgcatggagtagtgatgaa
gactga

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