Notothenia coriiceps (black rockcod): 104942912
Help
Entry
104942912 CDS
T04920
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03420
Nucleotide excision repair
ncc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104942912 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
104942912 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104942912 (ercc8)
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104942912 (ercc8)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
104942912 (ercc8)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
104942912 (ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
Motif
Other DBs
NCBI-GeneID:
104942912
NCBI-ProteinID:
XP_010766528
UniProt:
A0A6I9MT99
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MLGFLTARQAGVDDPLRLRRAESTRRVLGLKLNPDRDVDRIHGNGINTIDIEAVEGRYML
SGGADGVIVIYDLENYSRKLQYTCKAVCTVGRSSRYVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFAFEGNVYSHHLSPIARKHSLIAVGTTDPKIQLCDLKSGSRIH
VLQGHRAEILSVRWSPRYDHILATASADSKVKVWDVRRASGSLFTLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTGDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVCNESRKRLQFTV
SRGCSPEFVFVPCGSSVAVYALHTGELVTMLRGHYNNVDCCEFHPDYQELYTGGKDCNIL
AWVPAPRAPDVEEESTTANQAAADQSSVNPAFQDAWSSDED
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttggggtttcttactgccaggcaggctggtgtggatgatcctctgcgactgaggcgt
gcagagtcaacgcggagggtcctgggtctgaagttgaatcctgacagagatgttgataga
atccatggaaacggcatcaacaccattgacattgaagcagtagagggcagatacatgttg
tctggcggcgcagatggtgtgattgtcatctatgacctggagaactacagtaggaagcta
cagtacacctgcaaggcagtttgcactgtaggcaggtcgagtcggtatgtccacaaattc
agcgtagagacagtccagtggtatccttatgacacgggcatgtttgtctcgagttccttt
gacaagaccatgaaggtctgggacactgagacactgaagcctgccgaagtctttgcgttt
gagggcaatgtctacagccaccacctctcccccatcgccaggaagcacagtctcattgca
gttggcaccacagaccctaaaatccagctgtgtgacctgaagtctggttcacggattcat
gttcttcagggccacagagcagagatcctgtccgtgcggtggtcgccccgatacgatcac
atcttagccactgccagtgcagacagcaaagtgaaagtatgggatgtgcgtcgggcttct
ggtagcctcttcactctggaccaacacaatggagacaaatcaaaagcatcctctgaggca
gtgaacacggcgcataatggcagagtgaatggcctgtgcttcactggcgatggcctctac
ctcctcaccactggaactgatgaccgtatgcgactatggaatagtgcaactggggaaaac
accctggtaaattacgggaaggtctgcaacgagagccgtaaaaggcttcagtttacagtt
tcccgtggttgcagcccagagtttgtgtttgtgccctgcggcagctcggtggctgtgtat
gccctccacacaggagagctggtcaccatgctcagagggcactacaacaacgtggactgc
tgcgagtttcacccagactaccaggagctctatactggaggtaaagactgtaacatcctg
gcgtgggttcctgcccctcgtgccccagatgtggaagaagagtcaacaactgcaaatcag
gctgctgctgaccagtcctcagtgaacccggcctttcaggatgcatggagtagtgatgaa
gactga
DBGET
integrated database retrieval system