Notothenia coriiceps (black rockcod): 104944418
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Entry
104944418 CDS
T04920
Definition
(RefSeq) LOW QUALITY PROTEIN: speckle-type POZ protein-like A
KO
K10523
speckle-type POZ protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104944418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104944418
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104944418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTB
MATH
BTB_2
Motif
Other DBs
NCBI-GeneID:
104944418
NCBI-ProteinID:
XP_010768247
UniProt:
A0A6I9MV36
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLK
VPECQLSDDLGNLWECSRFTDCSLYVGGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDISDVDPDVFKEMMGFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCNSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggttcccacccctccccctcctggggagatgtcaagtggacctgtggcagag
agctggtgttacacacaggtcaaagtggtgaagttttcgtacatgtggaccataaacaac
tttagtttttgcagagaagaaatgggggaggtgttgaagagctccaccttctcctctggc
ccaaatgacaagatgaaatggtgtctgcgagtcaatcccaagggactcgatgatgagagc
aaagattatctgtcactgtatttactccttgttagttgtccaaaaagtgaagtcagagca
aagttcaagttttcgttgttgaacgctaaaagagaagagacaaaagcaatggaaagccaa
agagcatatagatttgtccaaggcaaagactggggtttcaaaaaatttattaggagagat
tttctccttgatgaagccaatggcctcttaccggatgacaagctcaccctcttctgtgag
gtaagcgttgtccaggactctgttaacatttcgggccagtccaacatgaacatgctgaag
gtaccggagtgtcagctgtctgatgacctggggaacctgtgggagtgttcacgcttcacg
gactgcagcctctatgtgggggggcaggagttcaaagcccacaaatccatcctcgcagcg
aggtcacctgtcttcaatgctatgttcgaacatgaaatggaggagagtaaaaagaaccgt
gttgacatcagtgacgtagacccggatgtctttaaggaaatgatgggcttcatctataca
ggaaaggcccccaacctggagaagatggcagacaatttgctggcagctgcagataaatac
gctctggagcgtttaaaggtcatgtgtgaggaggccttgtgcaacagcctttcagtggag
aacgtggccgacaccctcatcctcgcagacttgcacagtgccgagcagctcaaagcacaa
gccatagattttatcaacaggtgcagtgtcctgagacagctgggctgtaaagatggaaag
aactggaatagcaatcatgctacagacataatggagactgcaggctggaagtcaatgatc
caatcccacccccacttggtagccgaggccttccgcgccctggcttcagcacagtgccca
ccctttggtcttcccaggaaacgcctaaaacagtcctga
Notothenia coriiceps (black rockcod): 104946769
Help
Entry
104946769 CDS
T04920
Gene name
spop
Definition
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104946769 (spop)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104946769 (spop)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104946769 (spop)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTB
MATH
BACK
Motif
Other DBs
NCBI-GeneID:
104946769
NCBI-ProteinID:
XP_010770952
UniProt:
A0A6I9N2Y4
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKAEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWENSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTDKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NAAEILILADLHSADQLKTQAVDFINYHAAEVMETAGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagtcccgagtccccctccccctgcggaaatgtccagcgggcccgtggccgag
agctggtgttacacacagatcaaagtggtgaagttctcttacatgtggaccatcaacaac
ttcagcttctgtcgtgaggagatgggagaggtcatcaagagctccaccttctcttctggg
gccaacgacaagctgaaatggtgtttgcgagtgaatccgaagggcctggacgaggagagc
aaagactacctgtctctctacctgctgctggtcagctgtccgaaggcagaggtgcgcgcc
aagttcaaattctccatcctcaacgccaagggagaggagaccaaagccatggaaagccag
agggcatatcgctttgtccaggggaaagactggggcttcaaaaagttcatccgcagagac
ttcctcctagatgaggccaacggtcttctacctgacgacaagctcacgctcttctgcgag
gtaagcgtggtgcaggactcggtgaacatatctgggcagaacacgatgaacatggtgaag
gttcctgactgccggctagcggacgagctggggggattgtgggaaaactcccgcttcaca
gactgctccctgtgtgtggcaggacaggagtttcaggctcacaaagccatcctcgcagca
cgttcccctgtattcagcgccatgtttgagcacgagatggaggaaagcaaaaagaaccgt
gtggagatcaacgatgtggagccggaggttttcaaagagatgatgtgcttcatttacaca
gacaaagctcccaacctggacaagatggctgacgacttgctggcagcggctgacaagtat
gctctggagagactgaaggtcatgtgtgaagacgcgctgtgcaccagtctgtctgtggag
aacgcagcggagatcctcatcctggcggacctgcacagcgccgaccagctgaaaactcag
gccgtcgacttcatcaactaccacgctgcggaggtgatggagacggcggggtggaagtcc
atggtggcgtctcaccctcacctggtggccgaggcgtaccgctccctggcctcggcgcag
tgccccttcctcggacccccccgcaagcgcctcaaacaatcctaa
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integrated database retrieval system
