KEGG   Notothenia coriiceps (black rockcod): 104944919Help
Entry
104944919         CDS       T04920                                 

Gene name
setdb1
Definition
(RefSeq) histone-lysine N-methyltransferase SETDB1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    104944919 (setdb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncc03036]
    104944919 (setdb1)
Enzymes [BR:ncc01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     104944919 (setdb1)
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     104944919 (setdb1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104944919 (setdb1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Tudor_4 DUF5604 TUDOR_5 Pre-SET MBD
Motif
Other DBs
NCBI-GeneID: 104944919
NCBI-ProteinID: XP_010768826
LinkDB All DBs
Position
Unknown
AA seq 1121 aa AA seqDB search
MTKRMQLKDASTALQKTSQQVQKLVHIVTKPSLNAALPRSPLKPPPQSGIQASVPAVFVS
QAPSHSMTQPNPNITEDELRVGMTILGKKRTKTWHKGTLVSISPVGNGVFKYKVKFDKGK
SLLSGNHVAFEYNPTLEILYVGARVVAKYQDGILVWLYAGVVAEMPNNKNRMRFLIFFDD
GYASYVHLPDLHPVCRPLKRTWEDIEDASCRDFIEEYITAYPSRPMVLLKVGQIIKTEWE
GTWWKSKVEEVEGSLVKILFLDDKRSEWIYRGSTRLEPMFNLKMTSANTQEKKLAGQQRS
RPNMGALRSKGPVVQYTSDGHVGTSVKTPQGSPSQPPQISQQQSPQQQSPQQQKSQQQHQ
QQQQHQQQGLQPQQIQQILPPPQPPQPLRVDNKHQMAKKSTSPFIPGIGGTHASKIMQSL
SAGPMSPRMLSTQDIVGPTFKQSFPRPPLLVSFPPAIPQTMAVVPHQPSYRASTDRIFYL
AHACQPACLNRVRPVKPDVHRGKNPLLTPLLYDFRRMTGRRKVNRKMSFHVIYKAPCGLC
LRNMGEIQHYLFQTRCDFIFLEMFCLDPYVLVDRPFQPQRPFYYIPDITNGKEDIPLSCV
NEIDSGPPPKVAYSKERIPEDGVYINTSADFLVGCECTDGCRDKSKCSCHQLTLQATGCT
PGAQINTNAGFLHKRLEECLPTGIYECNKRCKCCAEMCTNRLVQHGLQVRLQLFKTQNKG
WGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEA
HCTDSDGSGVDASRIKIQPSALVTNKAGGRPPRKGESKPKAQTASSGDSNDEDEKDSKSE
DESDSSDDTFVKENYFSSSSVWRSYTTRGQVKGNKEGSQDSKDGLSLSAKGTDEEKNPPS
MPEETGKSKVALWLTSQGLKKESGDGKSQVKSESGKKQDVMTVSDSDDVQTISSGSEDNK
EKEKVIPGVTKKQVAVKSTRGIALKGSHGMMVKTGPPGGGGGQGGQGGKTGKQGHTGGGG
ENTYKNSRLFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFF
ASKRIRAGTELTWDYNYEVGSVEGKVLLCCCGSTECRGRLL
NT seq 3366 nt NT seq  +upstreamnt  +downstreamnt
atgaccaaaaggatgcaattaaaagatgcctcgacagcgctacagaaaacctcccagcag
gtgcagaagttggtccacattgtcaccaagccttcactaaatgctgctttgccacggtct
ccattaaagcctccaccgcagtcaggtattcaggcttcagtgccagcagtgtttgtgtcc
caggctccgtctcattccatgacgcagccgaacccgaacatcacagaagacgagctgaga
gtcgggatgaccattctgggaaagaaacgcaccaagacctggcacaaaggcaccctcgtt
tctatcagccctgtcggaaatggtgtattcaagtataaagtgaagtttgataaagggaag
agtctgctgtctgggaatcatgtagctttcgaatataaccccaccctggagattctgtat
gtcggggctcgtgtcgtcgccaagtaccaggacggcatcctggtgtggctctacgctgga
gtcgtggcagagatgcccaacaacaagaaccgcatgaggtttctgatattttttgatgat
ggctatgcttcatatgtccacctacctgatctccacccagtttgccgaccattgaagcgt
acctgggaggatatagaggatgcatcatgccgagacttcattgaggagtacatcacggca
tatcccagcaggcctatggtgctcctgaaggtcggacagatcatcaagacggagtgggag
ggaacctggtggaagagcaaagtggaggaggtggaagggagcttggtcaagatcctcttt
ttggatgacaagaggagtgaatggatttacagaggctccaccaggttggagccaatgttc
aacctgaagatgacctccgccaacacccaggagaagaagctggctggccagcagaggagc
cgtcctaacatgggggcgttgaggagtaaaggtccagtagtccagtacaccagtgacgga
catgttggaacttcggtcaaaacgccgcagggctcacccagccagcctccgcagatatca
caacaacaatcaccacaacaacaatcaccacaacaacaaaaatcacaacaacaacaccaa
caacaacaacaacaccaacaacagggtcttcagccacaacaaatccaacagattcttccg
cctcctcagccccctcagcctcttcgtgttgacaacaaacatcagatggcaaagaagagc
acctctccgtttattccagggataggagggacccatgcctccaaaatcatgcagtctctt
tctgccggccccatgagtccaagaatgttgagcacccaggatattgttggtcccactttc
aagcaatcctttccgagaccccctcttctggtctctttcccccctgctattccccaaacg
atggccgtcgtcccacatcagccctcttaccgcgcctccacggaccgcatcttctacctg
gcacatgcctgtcagcccgcatgtctgaaccgcgtcagacctgtaaaaccagacgtgcac
cgagggaagaaccccctcctcacacctctactgtacgacttcagacgcatgacgggacgg
cgcaaagttaaccggaagatgtctttccatgtgatctacaaggctccgtgtgggctttgc
ctgcgaaacatgggggagatccagcattacctcttccagacgcgctgtgactttatcttc
ttggagatgttctgtctcgacccctacgtgctcgtggaccggcccttccagccacagagg
cccttctattacattccagacatcactaatggaaaagaggacatccccctctcctgcgtc
aacgagatcgattccggcccgcctccgaaagtagcttacagtaaagagcggattcctgaa
gatggagtatacatcaacaccagtgcagacttcctggttgggtgtgagtgcaccgacggc
tgtcgagacaagtccaaatgctcctgccaccagctgacccttcaggctacaggctgtaca
cctggggcacagattaacaccaatgctggatttctgcacaaacgattagaggagtgcctc
cccacagggatctacgagtgtaataagcggtgtaaatgctgtgctgagatgtgcaccaac
aggctggtgcagcatggtctgcaggtgcgtctccagctctttaagacccagaacaaaggc
tggggcatccgctgtctggatgacgtggccaaaggctcttttgtctgcatctatgctggt
aaaatcttgacggacgactttgctgacaaagaaggtctagagatgggcgacgagtatttt
gccaatttggaccatatagagagtgtggagaacttcaaggagggctatgagagcgaggct
cactgcacggacagcgatgggagcggcgtggacgcgtcgaggataaaaatccaaccctcc
gctttagtaacaaataaagctggagggaggccgcccagaaagggtgagtccaagcccaaa
gcccaaaccgcaagctcaggagacagcaatgacgaagatgagaaggactcaaagagcgaa
gacgaaagtgacagttcggacgacacgtttgtgaaggaaaactacttcagctccagctcg
gtgtggaggagctacaccacccggggtcaggtcaagggcaacaaggaagggagtcaagac
agtaaagatggcttgagcctttcagcaaaaggaaccgatgaggagaagaatccgccgtcc
atgcctgaggagacggggaaaagcaaagtggctttatggctcaccagccaggggctgaag
aaggagtccggggacggcaaaagtcaagtgaagtcagagtcggggaagaagcaggatgtg
atgactgtctctgacagtgatgatgttcagaccatcagctctggatctgaagacaacaag
gagaaagagaaagtcatcccgggtgtgactaagaagcaggtagcagtgaaatctactcgt
gggatcgctctgaagggcagccatggcatgatggtgaaaacgggaccacctggaggcggg
ggagggcagggaggtcagggagggaaaacaggaaagcagggacacactggaggaggcggg
gaaaacacttacaaaaattcccgcctgttctttgacggagaagagtcctgctacatcatt
gatgccaagttggaaggaaatctcgggcggtacctcaatcacagctgtagtcctaacctt
ttcgtccagaatgtgtttgtggacacgcatgacttgaggtttccctgggtggcgttcttt
gccagcaagcggatccgggccggcacggagctgacgtgggactataactacgaggtgggc
agcgtggagggaaaggtgctgctgtgctgctgcgggtccaccgagtgcagagggaggctg
ctgtga

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