Notothenia coriiceps (black rockcod): 104947213
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Entry
104947213 CDS
T04920
Symbol
hmgcll1
Name
(RefSeq) 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00280
Valine, leucine and isoleucine degradation
ncc00650
Butanoate metabolism
ncc01100
Metabolic pathways
ncc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
104947213 (hmgcll1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
104947213 (hmgcll1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104947213 (hmgcll1)
Enzymes [BR:
ncc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
104947213 (hmgcll1)
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GFIT
Motif
Pfam:
HMGL-like
CopG_antitoxin
Motif
Other DBs
NCBI-GeneID:
104947213
NCBI-ProteinID:
XP_010771490
UniProt:
A0A6I9NB18
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Position
Unknown
AA seq
336 aa
AA seq
DB search
MGNVPTTVKHCLSYEQLIQDYPWLKRWLQEEKTITGHEYPEFVKIVEVGPRDGLQNEKEI
VPTGVKIQLIDMLSGTGLPVIEATSFVSSKWVPQMADHSDVLRGIQRAPHVRYPVLTPNM
QGFKDAVAAGATEVAVFGSASETFSKKNINCSIDESMLRFEEVINTAKEQQIPVRGYVSC
ALGCPHEGHIEPSKVSEVAKRLYAMGCYEISLGDTIGVGTPGSMLKMLQSVIEEVPAHAL
AVHCHDTYGQALPNILTALQMGVCVVDSAVAGLGGCPYAQGSSGNVSTEDVLYMLHGIGI
ETGVNLAKVIEAGDFICNALRRKTNSKVAQATGRTL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacgtacccactacagtgaagcactgcctgagctatgagcaactcatccaggac
tatccatggctgaagcgctggctgcaggaggagaagactattacaggacatgagtatcca
gagtttgttaaaatagttgaagtaggaccacgagatggacttcaaaatgaaaaggaaatt
gttccaacaggggtgaaaatccagctgatagacatgctctcgggaacaggcctgcctgtg
atcgaggccaccagctttgtctcttcaaagtgggtaccgcagatggcagaccactctgat
gtactcagaggaattcagagagcacctcatgttcggtatcctgttttgacacctaacatg
caaggcttcaaggatgctgttgcagctggtgctactgaggtggcggtgtttgggtcagcg
tctgaaaccttcagtaaaaagaatattaactgctctattgatgaaagcatgctgaggttt
gaggaagtcattaacactgccaaagagcaacagattccagtccgcggatatgtgtcttgt
gcccttggatgcccccatgagggacacattgaaccttccaaagtctctgaagtggccaag
aggttatatgcgatgggctgctatgagatttccttgggggataccatcggtgttggtact
ccaggctccatgttgaagatgctgcagagtgtgattgaggaggtgcccgcccacgctctc
gcagttcactgccatgacacttatgggcaagcactgcccaacatccttactgcacttcaa
atgggggtctgtgtggtggactctgcagtagctggcctgggaggttgcccatatgctcaa
ggttcatctggcaacgtttcaacagaggatgttctctacatgctccatggcattggcatt
gaaactggtgtgaatcttgccaaagtgatagaagccggtgacttcatctgcaatgcttta
cgtcgcaagacaaactccaaggttgcccaggcaacaggcagaacactgtga
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