Notothenia coriiceps (black rockcod): 104951713
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Entry
104951713 CDS
T04920
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ncc01100
Metabolic pathways
Module
ncc_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104951713
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104951713
Enzymes [BR:
ncc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
104951713
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
104951713
Glycosyltransferases [BR:
ncc01003
]
Glycan extension
O-Glycan
104951713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
104951713
NCBI-ProteinID:
XP_010776746
UniProt:
A0A6I9NQJ7
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MMIWLTRTERDRGTVYELMFKGDGPRDFTQVVLFRPFGPVLKVKSESVNTRSTFINIIVP
LSKRPEAFRQFINNFREVCIQKDSRVHLTVVYFGRDQIDQVKAVLDQTTRETRFRSFTLI
QLNEEFSRGRGLEVGARAWRRGQNALLFFCDVDIHFTADFLTSCRLNAEPGKRVYYPVLF
SQYNPSIIYSNQSLLPPVQKQLVIKKDTGFWRDFGFGMTCQYRSDFLNIGGFDRSIKGWG
LEDVHLYRKYLHSKLMVIRSPSRGLFHLWHEKDCADELPPDKYKMCMQTKAINEASHGQL
GELLFKPEIEAHLGKQKNQGI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatgatttggttgacccgtactgagcgggacagaggaactgtttatgagctgatgttt
aaaggcgacggcccacgggacttcacacaggtcgtcctcttcaggccgtttggtcccgta
ctgaaggtgaagagcgagagcgtgaacacgcgcagcacgttcatcaacatcattgtacct
ctgtccaagaggccagaggcttttaggcaattcatcaacaacttcagagaagtgtgcatc
cagaaggacagcagggttcatctgactgtggtctactttggtcgagatcagatagatcag
gtgaaggcagtcctggatcagaccaccagagaaactcggttcaggagcttcactctgatc
cagctgaatgaggagttttctcgtggtcgagggttggaggtgggcgcccgggcgtggaga
cgcggccagaacgctctgctctttttctgtgatgttgacatccacttcaccgctgacttc
ttaacttcttgtcgtctcaacgcagaacctggtaagagagtgtactacccagtgctcttc
agccagtacaacccgtctattatctacagtaatcagagtcttttacccccagttcaaaaa
caactggtgataaaaaaagacactggattctggagagactttgggtttggtatgacatgc
cagtacaggtctgatttcctcaacatagggggttttgaccgcagcatcaaaggctggggg
ttggaggacgtgcacctgtacaggaagtacctccacagtaagctaatggtgattcgctct
ccatcccggggccttttccacctgtggcacgagaaggactgtgcagacgagctccctcca
gacaaatacaagatgtgtatgcagaccaaagccataaacgaggcctcgcacggccagctc
ggggagcttttattcaaaccagagatcgaagctcatttgggcaagcagaaaaaccaagga
atatga
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