Notothenia coriiceps (black rockcod): 104952328
Help
Entry
104952328 CDS
T04920
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncc03037
]
104952328 (ttc28)
Cilium and associated proteins [BR:
ncc03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
104952328 (ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_10
TPR_2
TPR_MalT
RPN7
TPR_16
TPR_17
TPR_14
TPR_9
TPR_11
PUB
TPR_6
HlyE
DUF4698
Motif
Other DBs
NCBI-GeneID:
104952328
NCBI-ProteinID:
XP_010777441
UniProt:
A0A6I9NSJ7
LinkDB
All DBs
Position
Unknown
AA seq
2193 aa
AA seq
DB search
MNLVKMGNSVAFTAASMALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELG
NMGAVYIAMGDFENAVQCHEQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHT
HVLELAQELEEKSIEMRAYAGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASS
NLGIIHQMKGDYETALKLHKTHLAIAQELNDYAAQGRSYGNMGNAYNALGAFDQAVRYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALG
NLGNFHCSRGEFPQAVPYYEQYLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYE
QDLALAKDLHDKLSQAKAYCNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALG
NLGDIFVCKKDVAGAIQFYEQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHT
QELEVYQELGDLPGECKAHGHLAAVYMALGKYAMAFKSYEEQLELGRKLKDPVVEAQVYG
NMGITKMNVGVMEEAIGYLEQQLATLQQLSGNEAMMDRGRAYGNLGDCYEALGDFEEAIK
YYDQYLAVAQSLNRMQDQEKAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQ
AYGELGALHSQLGNYEQAISCLERQLTIARDTQDRILEGDASCGLGTVYQSMGEYETALR
CHQSDLEIAEEAGSPARQARAYGNLGLTYEALGNYERAVVFQEQHLSVAAQTNDLAAKTL
AYGSLGRTHHALQNYSQAVMYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQH
QLYRASALFETIRHEAQHSTDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTR
AFADLLVERQTGQQDSDPYTPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGIL
KFHEVYLGEGMSEVGSDFQEGGNGGVVCGSSLEQYIASAREALGVESYYSRGCSSSETES
EAGDLLDQQFEELNNKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPTKDGTSS
LPRRSSNLGKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGS
SSNEYLYERFSLIAIPSIQGLGSNAKTNSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWL
WGPMPSAEEEAHMVAELLGCQPLAGPAATKERVMSALSQAECAHFATHISWKLAALVLSP
NPESVPGGSSASGGVGTLGRGAGGRRGSSGRGRKGSGSGYTIPESLHMQDDSSDVESICD
SPPLQEFLLTAADILDMRLPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGVQCTLVSL
WPVPVAASKVFVHAFYTAMLNGTKASAALADAMKNVQSSKQYSHPSNWAGYMLIGNDVKL
NSPSSLIGQALAEILQYPDRARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGG
VPGWQALLTAVGFRLDSVGTGMPCAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCK
LITASEAGEQLINRAVKNMVAMLHQVLVQLQTGEKEQDFSLQPIQVSISVQLWRLPGCHE
FLAALGFDLCEVGQEEVVLKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLES
LASAQSVSNPMPMGYSTLPFSPPYLDNQASDAISVYSLSSVASSMSFVSKTDCDFLGHRQ
RGGATAHYSIHKHPHVPRSRSSPHGAAAAAVAGARGDDEEYEGFSIISSEPLGSHCDSLP
LPPGHSQRHRGGRGVVGGSSTGAGRGYTVSVSSRGSVSTPTSPVKTCLVPSPNSPFQKVG
KVSSSDTGESDQSSTETDSTVKSQEEKAVPLDPQELAQKILEETQSHLRAVGSLQRAGPE
GAAAVGTSVRSSTFRSSETSAFSRPNSSASGRAQSSPRPKPPSRSSSLQKISSGYNSPAI
SESSQREGSHPSPTLDSQFRLKYPSSPYSNHISRSPSNVSPISGHLSPTGSAPSPALSYS
STGSTCSTSADIPDLDRLRRGVIDEKVQAIHNLKTFWANAAAQHQSHLGPVRAVHGAPGP
LASAGRDVLSLLNLSPRRCSPNDNQDSLELRELGLQSLDRNNKNGHNFSNPRQVAPSPTI
STSSSPGPRSIRLPAGNGYKFLSPGRFFPSSKC
NT seq
6582 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggtcaaaatgggcaacagtgtggccttcactgctgcttcaatggcgctgagc
agcttgggccatgtatatacagccattggggactatcccaacgccctcgccagccacaag
cagtgtgtcctgctggccaagcagtccaaggatcagctgtctgaggctcgcgagctgggg
aacatgggggccgtctacatcgccatgggagactttgaaaatgctgtccaatgccacgag
cagcacctgggcatcgccaaggccctggaaaataaacgagaggaagctcgggcctatagt
aacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccatact
catgttctggagctcgcccaggagctggaggaaaagtccattgagatgagagcctacgca
gggctgggtcatgctgctcgctgcatgcaggacttggagagggccaagcagtaccacgaa
cagcagctgtctatagctgagggtctgaaggacagggccgccgaggggagggcctcctcc
aatctgggcatcatccaccagatgaagggggactatgagaccgcactgaaactccacaaa
acacacctggccattgctcaggagctgaatgactatgctgctcagggccggtcctatggc
aacatgggtaacgcctacaatgccctgggagccttcgaccaggctgtccgataccaccgc
caggagctccagatttccatggaggtaaatgaccgggcctcgcaggcgtccacccatgga
aacctggccgtggcttaccaagccctgggagcccatgaccgtgctctgcaacattaccag
aaccacctcaacattgctcgtgagctcagggatgtccagagcgaggcgcgggctctgggc
aacctcggcaacttccactgctctcgaggagagttccctcaggctgtgccgtactatgag
cagtacctccgcttgtcccccgaccttcaagacatggagagcgaagggaaagtttgtcac
aatctgggttatgcccactactgtctgggcaactaccaggatgccgttaaatactatgag
caggacttagctctggccaaggatcttcatgacaaactgagtcaggccaaggcttactgt
aacctcggtttggcttttaaagcgctgggagacttcactaaggcagaggagtgtcagaaa
tacctgctgtcactggcccagtccctgaacaatgcacaggctcgcttcagagctctgggg
aacctcggggacatatttgtctgtaaaaaagatgtggctggagccattcagttttacgag
caacaactggccttagctcaccaggttaaggagcgtaggatggaggcatgtgcctatgcc
gccctcggggccacctacagacttgtgcagaaatatgacaaagctctaggctaccacacc
caggagctggaggtctatcaagagctgggcgacttgccaggagagtgcaaagcccacggt
cacctggcagctgtctacatggctctggggaaatacgccatggcctttaagagctacgag
gagcagttggagctaggtcgcaagctgaaggatcccgtagtggaggctcaagtgtacggg
aatatgggcatcactaaaatgaatgtaggcgtgatggaggaagctattggctatctggag
cagcagctggccactttacagcagctgagtggcaacgaggccatgatggacaggggcagg
gcctatggaaacctgggagactgttatgaggctttgggagactttgaggaagccatcaag
tattatgaccagtatctggctgtggcccagagcctcaaccgcatgcaggaccaggagaag
gcctacagaggcttaggcaatggacacagggccatgggaaacctacagcagtcgcttgtg
tgttttgagaagcgtctggtagtggctcatgagctgggggagtgtggaggcaaggctcag
gcctacggtgaactgggcgcactgcacagccagctgggaaattacgagcaggcgatttcc
tgtctggagcgtcagctgaccatcgcccgtgacacccaggaccggatcttagagggtgac
gccagctgcggtttgggcactgtatatcaatctatgggagagtatgagacggccctgcga
tgccaccaaagtgacctggagattgcggaggaagcgggcagtcctgcgcgccaggcccgc
gcctatgggaacttgggccttacctacgaggcgctcgggaactacgagcgggcggtggtg
ttccaggagcagcacctgagtgtggcggctcagactaatgacttggctgccaagacactg
gcctatggcagcctggggaggacacaccacgcactgcaaaactactcacaggctgtcatg
tacctgcaggaaggcctgcggcttgcagagcagctggctcggcgtgaggacgaggcaaag
atccgccatcgtcttgggctctctctgtgggccagtgggaatctggaggaggcccaacat
cagctctaccgggcttctgcactgtttgagaccatccgccatgaagcccagcacagcaca
gactacaaactctccctgtttgacctgcaaacctcctgctaccaggcactccaaagggtc
ctcgtcagcctaggccaccacgatgaggctctggcggtagcggagcggggtcgcacacga
gccttcgctgacctcctggtggagcggcagacaggccagcaggactcggacccctacacc
ccggtaacagtggagcacatattggacaccgtcaacagccagagggcgttggtgctttat
ttctcaatggcggctggctacctgtacagctggctgctggctccaggagcaggcatcctg
aagtttcatgaggtgtatctgggcgagggcatgtcagaagtagggtctgacttccaggag
gggggcaacggaggagtggtttgcggctcctcgctggagcagtacatcgccagtgcccgt
gaggctctgggagttgaatcgtattacagcagagggtgctcgagcagcgagacagagagc
gaggcaggagatttgttggaccaacaatttgaggagctcaacaacaagcttaactctgtc
accgatccaacgggcttcctgcgcatggtgtccagaaacaacctgttcaacaggagctgc
cagagtatgaccagcctgttcagtaacaccatgtcacccaccaaagacggtacctcttcc
ctgcctcgtcgctccagcaacctcggaaagcctccacttcgggcactttatgatttgctc
attgcacctatggaggggggcttgatgcactccagtgggccagttggcagacacagacaa
ctggtgatggtgctggagggagaactgtacctcatccccttcgctctgttaaaaggaagc
tcctctaatgaatacctctatgagcgcttcagcctcatcgccattccctccattcaaggc
ctcggatctaatgcaaagacgaactcccggcgccctggaccagctccttgcggaggtgtc
tccatggcggcagtggtggggaacccccgcctgccctcacctgtcatggaccgctggctg
tggggacccatgccctctgcagaagaggaggctcacatggtggcagagcttctgggctgc
cagcccctggccggccctgctgctaccaaggaaagggtgatgagcgccctctcacaggct
gagtgtgctcactttgccacccacatttcctggaaattagcagctctggtgctctccccg
aaccctgagagcgtgcctggtgggtcgagtgccagtgggggagtagggacattggggaga
ggggccgggggaaggagaggcagcagtggtcgaggcaggaagggctccggaagcggctac
accatccccgagtccctccacatgcaggatgacagcagtgacgtggagagcatatgtgat
agtccgccgctgcaggagttcctgctcacagctgcagatatactggacatgaggttgcca
gtcaaactggtggtgcttgggtcgtaccaggagtccagcagtaaagtgactgcagatggt
gttgtgggattgacccgggccttcctggctgccggggtgcagtgtactctcgtgtccttg
tggcctgtccctgtcgcagcctccaaagtttttgtccatgctttttacactgccatgctt
aatgggaccaaagctagtgcagcactggcagatgccatgaagaatgtccagagcagcaag
cagtactctcacccctccaactgggcaggatacatgctgattggaaatgatgtgaagctt
aacagtccctcttccctcattggccaagctttggcagagattctacagtatccagatcga
gcacgagatgctctgagagttttactccacctggtggagaagtctcttcagaggatacag
aacggccagcggaactccatgtatacatcccagcaaagtgttgagaacaaggtggggggg
gtccctggctggcaggctctgttgacagccgtgggcttccgtcttgactctgtgggcact
ggtatgccctgtgccgtctttttccccactgcggatccaggagacaggctccagcagtgc
agcaccactttacaatcactgctgggtctgccgccgccagctctccaggctttgtgcaaa
ctcatcacagcttcagaggcaggagagcagctcatcaatcgggctgttaaaaatatggtg
gcaatgctccatcaggtgctagtccaactacagacaggagaaaaagaacaggatttctcc
ctccagcccattcaggtgtccatcagtgtgcagctatggaggctgccaggatgccatgaa
tttctggctgctcttggatttgacttatgtgaggtaggccaagaagaagtggtgctaaag
acaggcaagctagccaaccgccgcaccttgcactttgctctccagtctctgctggcgctg
tttgactccacagaactgcccaagcgtctaagcctggatagctcatcttcccttgagtct
ctagcttcagcccagtctgtgtctaaccccatgcccatgggatactcaacccttcctttc
tctcctccttacctggacaatcaggcctcagatgccatctctgtgtatagcctcagctct
gtagcctcctccatgagctttgtttccaagacagattgtgatttccttggtcatcggcag
cgcggtggggccacagcacactactctatccacaaacaccctcatgtcccccgcagtcgc
tcgtctcctcatggggcagctgcagcggcagtggctggagcccggggggatgatgaggaa
tatgagggcttttctattatcagcagcgagccactgggaagccactgtgactctctgccc
ctgcccccaggccacagccagcgccaccgtggaggcagaggggttgttggtgggtccagc
acaggagcagggagaggctacactgtatcagtatcgtcaaggggcagtgtcagcaccccc
acatcccccgttaaaacatgcctggtgcccagcccaaactcaccattccagaaggtggga
aaggtgagcagttcagatacaggtgaatcggaccagtccagtactgagacggacagcact
gtcaagtctcaggaagaaaaagctgtccctttggaccctcaggagctggcacagaagatt
ctggaggagactcagagccatctacgggctgtgggtagtcttcagcgggccgggccagag
ggtgcagcagctgtaggaacctcagtgcgaagcagcaccttccgctcttctgaaactagt
gcgttcagccgtcctaacagcagtgctagtggccgagctcaatcttcccccagacccaaa
cctccctcccgttcctcttctcttcagaaaataagctctggctacaacagtcctgcaatc
tctgagtcttcacaaagggagggcagccatccttcgcccactctggacagccagttcaga
ttgaagtacccaagttctccatacagcaaccacatctctcgctctccgagtaatgtgtct
cccatttcaggtcacctttccccgacaggaagtgctccatcccctgccctgtcgtactcc
tctacaggctctacttgctctacttcggctgatatacctgacttggaccggctacgaaga
ggggtcattgatgaaaaagtccaagctattcacaatctgaagaccttttgggctaacgct
gcagcccagcaccagtcacacctaggtcctgtcagagctgtccacggtgctcctggccct
cttgcttctgctggcagggatgtactgagccttctgaacctctctccacgtcgttgctcc
cctaatgataaccaagacagcctggagctgcgggagctggggctgcagtcactagatagg
aacaacaagaatggacacaacttctccaaccctagacaagtggccccgtcacccacaatt
tccacaagcagtagccctggtcctcgttctatccgactacctgctggcaatggatacaag
ttcctgtcgcctgggagatttttcccttcctctaaatgctga
DBGET
integrated database retrieval system