KEGG   Notothenia coriiceps (black rockcod): 104952328
Entry
104952328         CDS       T04920                                 
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28
  KO
K24936  tetratricopeptide repeat protein 28
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ncc03037]
    104952328 (ttc28)
Cilium and associated proteins [BR:ncc03037]
 Motile cilia and associated proteins
  Other motile cilia associated proteins
   104952328 (ttc28)
SSDB
Motif
Pfam: TPR_12 TPR_7 TPR_1 CHAT TPR_8 TPR_10 TPR_2 TPR_MalT RPN7 TPR_16 TPR_17 TPR_14 TPR_9 TPR_11 PUB TPR_6 HlyE DUF4698
Other DBs
NCBI-GeneID: 104952328
NCBI-ProteinID: XP_010777441
UniProt: A0A6I9NSJ7
LinkDB
Position
Unknown
AA seq 2193 aa
MNLVKMGNSVAFTAASMALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELG
NMGAVYIAMGDFENAVQCHEQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHT
HVLELAQELEEKSIEMRAYAGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASS
NLGIIHQMKGDYETALKLHKTHLAIAQELNDYAAQGRSYGNMGNAYNALGAFDQAVRYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALG
NLGNFHCSRGEFPQAVPYYEQYLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYE
QDLALAKDLHDKLSQAKAYCNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALG
NLGDIFVCKKDVAGAIQFYEQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHT
QELEVYQELGDLPGECKAHGHLAAVYMALGKYAMAFKSYEEQLELGRKLKDPVVEAQVYG
NMGITKMNVGVMEEAIGYLEQQLATLQQLSGNEAMMDRGRAYGNLGDCYEALGDFEEAIK
YYDQYLAVAQSLNRMQDQEKAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQ
AYGELGALHSQLGNYEQAISCLERQLTIARDTQDRILEGDASCGLGTVYQSMGEYETALR
CHQSDLEIAEEAGSPARQARAYGNLGLTYEALGNYERAVVFQEQHLSVAAQTNDLAAKTL
AYGSLGRTHHALQNYSQAVMYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQH
QLYRASALFETIRHEAQHSTDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTR
AFADLLVERQTGQQDSDPYTPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGIL
KFHEVYLGEGMSEVGSDFQEGGNGGVVCGSSLEQYIASAREALGVESYYSRGCSSSETES
EAGDLLDQQFEELNNKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPTKDGTSS
LPRRSSNLGKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGS
SSNEYLYERFSLIAIPSIQGLGSNAKTNSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWL
WGPMPSAEEEAHMVAELLGCQPLAGPAATKERVMSALSQAECAHFATHISWKLAALVLSP
NPESVPGGSSASGGVGTLGRGAGGRRGSSGRGRKGSGSGYTIPESLHMQDDSSDVESICD
SPPLQEFLLTAADILDMRLPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGVQCTLVSL
WPVPVAASKVFVHAFYTAMLNGTKASAALADAMKNVQSSKQYSHPSNWAGYMLIGNDVKL
NSPSSLIGQALAEILQYPDRARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGG
VPGWQALLTAVGFRLDSVGTGMPCAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCK
LITASEAGEQLINRAVKNMVAMLHQVLVQLQTGEKEQDFSLQPIQVSISVQLWRLPGCHE
FLAALGFDLCEVGQEEVVLKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLES
LASAQSVSNPMPMGYSTLPFSPPYLDNQASDAISVYSLSSVASSMSFVSKTDCDFLGHRQ
RGGATAHYSIHKHPHVPRSRSSPHGAAAAAVAGARGDDEEYEGFSIISSEPLGSHCDSLP
LPPGHSQRHRGGRGVVGGSSTGAGRGYTVSVSSRGSVSTPTSPVKTCLVPSPNSPFQKVG
KVSSSDTGESDQSSTETDSTVKSQEEKAVPLDPQELAQKILEETQSHLRAVGSLQRAGPE
GAAAVGTSVRSSTFRSSETSAFSRPNSSASGRAQSSPRPKPPSRSSSLQKISSGYNSPAI
SESSQREGSHPSPTLDSQFRLKYPSSPYSNHISRSPSNVSPISGHLSPTGSAPSPALSYS
STGSTCSTSADIPDLDRLRRGVIDEKVQAIHNLKTFWANAAAQHQSHLGPVRAVHGAPGP
LASAGRDVLSLLNLSPRRCSPNDNQDSLELRELGLQSLDRNNKNGHNFSNPRQVAPSPTI
STSSSPGPRSIRLPAGNGYKFLSPGRFFPSSKC
NT seq 6582 nt   +upstreamnt  +downstreamnt
atgaacctggtcaaaatgggcaacagtgtggccttcactgctgcttcaatggcgctgagc
agcttgggccatgtatatacagccattggggactatcccaacgccctcgccagccacaag
cagtgtgtcctgctggccaagcagtccaaggatcagctgtctgaggctcgcgagctgggg
aacatgggggccgtctacatcgccatgggagactttgaaaatgctgtccaatgccacgag
cagcacctgggcatcgccaaggccctggaaaataaacgagaggaagctcgggcctatagt
aacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccatact
catgttctggagctcgcccaggagctggaggaaaagtccattgagatgagagcctacgca
gggctgggtcatgctgctcgctgcatgcaggacttggagagggccaagcagtaccacgaa
cagcagctgtctatagctgagggtctgaaggacagggccgccgaggggagggcctcctcc
aatctgggcatcatccaccagatgaagggggactatgagaccgcactgaaactccacaaa
acacacctggccattgctcaggagctgaatgactatgctgctcagggccggtcctatggc
aacatgggtaacgcctacaatgccctgggagccttcgaccaggctgtccgataccaccgc
caggagctccagatttccatggaggtaaatgaccgggcctcgcaggcgtccacccatgga
aacctggccgtggcttaccaagccctgggagcccatgaccgtgctctgcaacattaccag
aaccacctcaacattgctcgtgagctcagggatgtccagagcgaggcgcgggctctgggc
aacctcggcaacttccactgctctcgaggagagttccctcaggctgtgccgtactatgag
cagtacctccgcttgtcccccgaccttcaagacatggagagcgaagggaaagtttgtcac
aatctgggttatgcccactactgtctgggcaactaccaggatgccgttaaatactatgag
caggacttagctctggccaaggatcttcatgacaaactgagtcaggccaaggcttactgt
aacctcggtttggcttttaaagcgctgggagacttcactaaggcagaggagtgtcagaaa
tacctgctgtcactggcccagtccctgaacaatgcacaggctcgcttcagagctctgggg
aacctcggggacatatttgtctgtaaaaaagatgtggctggagccattcagttttacgag
caacaactggccttagctcaccaggttaaggagcgtaggatggaggcatgtgcctatgcc
gccctcggggccacctacagacttgtgcagaaatatgacaaagctctaggctaccacacc
caggagctggaggtctatcaagagctgggcgacttgccaggagagtgcaaagcccacggt
cacctggcagctgtctacatggctctggggaaatacgccatggcctttaagagctacgag
gagcagttggagctaggtcgcaagctgaaggatcccgtagtggaggctcaagtgtacggg
aatatgggcatcactaaaatgaatgtaggcgtgatggaggaagctattggctatctggag
cagcagctggccactttacagcagctgagtggcaacgaggccatgatggacaggggcagg
gcctatggaaacctgggagactgttatgaggctttgggagactttgaggaagccatcaag
tattatgaccagtatctggctgtggcccagagcctcaaccgcatgcaggaccaggagaag
gcctacagaggcttaggcaatggacacagggccatgggaaacctacagcagtcgcttgtg
tgttttgagaagcgtctggtagtggctcatgagctgggggagtgtggaggcaaggctcag
gcctacggtgaactgggcgcactgcacagccagctgggaaattacgagcaggcgatttcc
tgtctggagcgtcagctgaccatcgcccgtgacacccaggaccggatcttagagggtgac
gccagctgcggtttgggcactgtatatcaatctatgggagagtatgagacggccctgcga
tgccaccaaagtgacctggagattgcggaggaagcgggcagtcctgcgcgccaggcccgc
gcctatgggaacttgggccttacctacgaggcgctcgggaactacgagcgggcggtggtg
ttccaggagcagcacctgagtgtggcggctcagactaatgacttggctgccaagacactg
gcctatggcagcctggggaggacacaccacgcactgcaaaactactcacaggctgtcatg
tacctgcaggaaggcctgcggcttgcagagcagctggctcggcgtgaggacgaggcaaag
atccgccatcgtcttgggctctctctgtgggccagtgggaatctggaggaggcccaacat
cagctctaccgggcttctgcactgtttgagaccatccgccatgaagcccagcacagcaca
gactacaaactctccctgtttgacctgcaaacctcctgctaccaggcactccaaagggtc
ctcgtcagcctaggccaccacgatgaggctctggcggtagcggagcggggtcgcacacga
gccttcgctgacctcctggtggagcggcagacaggccagcaggactcggacccctacacc
ccggtaacagtggagcacatattggacaccgtcaacagccagagggcgttggtgctttat
ttctcaatggcggctggctacctgtacagctggctgctggctccaggagcaggcatcctg
aagtttcatgaggtgtatctgggcgagggcatgtcagaagtagggtctgacttccaggag
gggggcaacggaggagtggtttgcggctcctcgctggagcagtacatcgccagtgcccgt
gaggctctgggagttgaatcgtattacagcagagggtgctcgagcagcgagacagagagc
gaggcaggagatttgttggaccaacaatttgaggagctcaacaacaagcttaactctgtc
accgatccaacgggcttcctgcgcatggtgtccagaaacaacctgttcaacaggagctgc
cagagtatgaccagcctgttcagtaacaccatgtcacccaccaaagacggtacctcttcc
ctgcctcgtcgctccagcaacctcggaaagcctccacttcgggcactttatgatttgctc
attgcacctatggaggggggcttgatgcactccagtgggccagttggcagacacagacaa
ctggtgatggtgctggagggagaactgtacctcatccccttcgctctgttaaaaggaagc
tcctctaatgaatacctctatgagcgcttcagcctcatcgccattccctccattcaaggc
ctcggatctaatgcaaagacgaactcccggcgccctggaccagctccttgcggaggtgtc
tccatggcggcagtggtggggaacccccgcctgccctcacctgtcatggaccgctggctg
tggggacccatgccctctgcagaagaggaggctcacatggtggcagagcttctgggctgc
cagcccctggccggccctgctgctaccaaggaaagggtgatgagcgccctctcacaggct
gagtgtgctcactttgccacccacatttcctggaaattagcagctctggtgctctccccg
aaccctgagagcgtgcctggtgggtcgagtgccagtgggggagtagggacattggggaga
ggggccgggggaaggagaggcagcagtggtcgaggcaggaagggctccggaagcggctac
accatccccgagtccctccacatgcaggatgacagcagtgacgtggagagcatatgtgat
agtccgccgctgcaggagttcctgctcacagctgcagatatactggacatgaggttgcca
gtcaaactggtggtgcttgggtcgtaccaggagtccagcagtaaagtgactgcagatggt
gttgtgggattgacccgggccttcctggctgccggggtgcagtgtactctcgtgtccttg
tggcctgtccctgtcgcagcctccaaagtttttgtccatgctttttacactgccatgctt
aatgggaccaaagctagtgcagcactggcagatgccatgaagaatgtccagagcagcaag
cagtactctcacccctccaactgggcaggatacatgctgattggaaatgatgtgaagctt
aacagtccctcttccctcattggccaagctttggcagagattctacagtatccagatcga
gcacgagatgctctgagagttttactccacctggtggagaagtctcttcagaggatacag
aacggccagcggaactccatgtatacatcccagcaaagtgttgagaacaaggtggggggg
gtccctggctggcaggctctgttgacagccgtgggcttccgtcttgactctgtgggcact
ggtatgccctgtgccgtctttttccccactgcggatccaggagacaggctccagcagtgc
agcaccactttacaatcactgctgggtctgccgccgccagctctccaggctttgtgcaaa
ctcatcacagcttcagaggcaggagagcagctcatcaatcgggctgttaaaaatatggtg
gcaatgctccatcaggtgctagtccaactacagacaggagaaaaagaacaggatttctcc
ctccagcccattcaggtgtccatcagtgtgcagctatggaggctgccaggatgccatgaa
tttctggctgctcttggatttgacttatgtgaggtaggccaagaagaagtggtgctaaag
acaggcaagctagccaaccgccgcaccttgcactttgctctccagtctctgctggcgctg
tttgactccacagaactgcccaagcgtctaagcctggatagctcatcttcccttgagtct
ctagcttcagcccagtctgtgtctaaccccatgcccatgggatactcaacccttcctttc
tctcctccttacctggacaatcaggcctcagatgccatctctgtgtatagcctcagctct
gtagcctcctccatgagctttgtttccaagacagattgtgatttccttggtcatcggcag
cgcggtggggccacagcacactactctatccacaaacaccctcatgtcccccgcagtcgc
tcgtctcctcatggggcagctgcagcggcagtggctggagcccggggggatgatgaggaa
tatgagggcttttctattatcagcagcgagccactgggaagccactgtgactctctgccc
ctgcccccaggccacagccagcgccaccgtggaggcagaggggttgttggtgggtccagc
acaggagcagggagaggctacactgtatcagtatcgtcaaggggcagtgtcagcaccccc
acatcccccgttaaaacatgcctggtgcccagcccaaactcaccattccagaaggtggga
aaggtgagcagttcagatacaggtgaatcggaccagtccagtactgagacggacagcact
gtcaagtctcaggaagaaaaagctgtccctttggaccctcaggagctggcacagaagatt
ctggaggagactcagagccatctacgggctgtgggtagtcttcagcgggccgggccagag
ggtgcagcagctgtaggaacctcagtgcgaagcagcaccttccgctcttctgaaactagt
gcgttcagccgtcctaacagcagtgctagtggccgagctcaatcttcccccagacccaaa
cctccctcccgttcctcttctcttcagaaaataagctctggctacaacagtcctgcaatc
tctgagtcttcacaaagggagggcagccatccttcgcccactctggacagccagttcaga
ttgaagtacccaagttctccatacagcaaccacatctctcgctctccgagtaatgtgtct
cccatttcaggtcacctttccccgacaggaagtgctccatcccctgccctgtcgtactcc
tctacaggctctacttgctctacttcggctgatatacctgacttggaccggctacgaaga
ggggtcattgatgaaaaagtccaagctattcacaatctgaagaccttttgggctaacgct
gcagcccagcaccagtcacacctaggtcctgtcagagctgtccacggtgctcctggccct
cttgcttctgctggcagggatgtactgagccttctgaacctctctccacgtcgttgctcc
cctaatgataaccaagacagcctggagctgcgggagctggggctgcagtcactagatagg
aacaacaagaatggacacaacttctccaaccctagacaagtggccccgtcacccacaatt
tccacaagcagtagccctggtcctcgttctatccgactacctgctggcaatggatacaag
ttcctgtcgcctgggagatttttcccttcctctaaatgctga

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