KEGG   Notothenia coriiceps (black rockcod): 104952821Help
Entry
104952821         CDS       T04920                                 

Gene name
sdha
Definition
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc00020  Citrate cycle (TCA cycle)
ncc00190  Oxidative phosphorylation
ncc01100  Metabolic pathways
ncc01200  Carbon metabolism
Module
ncc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ncc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ncc_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    104952821 (sdha)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    104952821 (sdha)
Enzymes [BR:ncc01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     104952821 (sdha)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Thi4 GIDA Pyr_redox_2 FAD_binding_3 DAO HI0933_like
Motif
Other DBs
NCBI-GeneID: 104952821
NCBI-ProteinID: XP_010778035
LinkDB All DBs
Position
Unknown
AA seq 663 aa AA seqDB search
MASVRAASRLLSKRILSKTTAVPAAAVQGSRDFHFSIYGKKTSAKVSDDISTQYPVVDHE
FDAVVVGAGGAGLRAAFGLSEAGFNTACITKLFPTRSHTVAAQGGINAALGNMEEDDWRW
HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTEEGKIYQRAFGGQSLKYG
KGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECKGVIALCMED
GSIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIY
GAGCLITEGCRGEGGILVNSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPEK
DHVYLQLNHLPPQQLATRLPGISETAMIFAGVDVTKDPIPVLPTVHYNMGGIPTNYKGQV
ITYTEGSDKVVPGLYACGESACASVHGANRLGANSLLDLVVFGRACALTIAEENKPGEKL
SPLAPSAGEESVANLDKLRYANGSLRTSEIRLNMQKTMQAHAAVFRTGSVLKEGCEKMDA
VYQTLADIKTFDRGIVWNTDLVESLELQNLMLNGVQTINSAEQRKESRGAHAREDFKDRL
DEYDYSKPLTGQVKKPFEQHWRKHTMSTVDVKTGKVSLEYRPVIDTSLDEQECAHVPPAI
RSY
NT seq 1992 nt NT seq  +upstreamnt  +downstreamnt
atggcgagtgtccgtgctgcctcccgtctactctccaagaggatattatctaaaacaaca
gctgtccctgctgctgcagttcagggatccagagactttcacttctccatctatggcaag
aagacaagtgccaaagtatccgatgatatttctactcagtacccagtagttgatcatgag
tttgatgctgtggtggtaggagctggaggagcagggctgagggcagccttcggcctgtct
gaggctggcttcaacaccgcctgcatcaccaagctcttccccaccaggtctcacactgtt
gctgcacagggcgggattaatgcagctcttggaaacatggaggaggatgactggaggtgg
catttctacgacacagtgaagggatctgattggttgggcgaccaggatgctatccattac
atgacagagcaggctcctgcagccgtagtggagctggagaactttggcatgcccttcagc
cgtactgaagagggcaagatctaccagagggcctttggaggtcagagtctcaagtatgga
aaaggaggccaggcccatcgctgctgctgtgtagcagacaggacaggacactcactgctg
catacactttacggacggtctcttcgttacgacaccagttactttgtagagtactttgcc
ctggacctgctgatggaaaatggagagtgtaaaggagtgatcgctctctgcatggaggac
ggatctattcaccgcttcagggccaagaatactgtcattgctactgggggttatggaaga
acctatttcagctgcacatctgcccacactagtaccggtgatggaaatgcaatggtgacc
agagctggcctgccctgccaggatttggagttcgtacagttccatcctactgggatctac
ggagccggttgtctgattacagagggttgccgtggagagggaggcatcctggtcaacagt
gagggagagcggttcatggaacgctacgcacccaacgccaaggacctggcctccagagat
gtggtgtcccgctccatgaccatcgagatcagagagggcaggggtgttggtccagagaag
gaccacgtgtatctgcagctcaaccacctgcccccccagcagctggccacacggctgcct
ggtatctcagagacggccatgatcttcgctggagtcgatgtcactaaagatcccatccct
gttctgcccaccgtccattacaatatgggtggaatccccaccaactacaagggacaggtg
atcacttatactgaaggatccgacaaggtggttcctggcctgtatgcgtgcggcgagtcg
gcgtgtgccagtgtccatggagccaaccggctgggtgctaactctctgctggatctggtg
gtgtttggaagagcctgcgccctcaccatcgccgaggagaacaagccaggagagaaactg
tcccctctggcgcccagtgcaggagaggagtctgtggccaacctggacaagctgaggtac
gccaacggaagcctgagaacctccgagatcaggctcaacatgcagaagactatgcaggcc
cacgctgccgtgttccgtaccggctccgttctgaaggagggatgcgaaaagatggatgct
gtttaccagaccttggctgacatcaagacctttgacagaggcatcgtgtggaacacagac
ctggtggaaagtttggagctgcagaacctgatgctgaatggggtccagaccatcaactct
gccgagcagaggaaggagagcaggggagcccacgccagggaggacttcaaggatcgtctc
gatgagtatgactactccaagcccctgacgggccaggtgaagaagcccttcgaacagcac
tggaggaaacacactatgtccacagtcgacgtaaagactggaaaggtgagcctggagtac
cgccctgtcatcgacacctctctggatgagcaggaatgtgcccacgtccctcctgccatc
cgctcctactaa

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