Notothenia coriiceps (black rockcod): 104953104
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Entry
104953104 CDS
T04920
Gene name
mgrn1
Definition
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04120
Ubiquitin mediated proteolysis
ncc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104953104 (mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104953104 (mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104953104 (mgrn1)
Enzymes [BR:
ncc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104953104 (mgrn1)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104953104 (mgrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
104953104
NCBI-ProteinID:
XP_010778334
UniProt:
A0A6I9NL51
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTPVEEGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKNPSLVSETVHYKRGVSQQFSMPSFKIDF
TEWKEEDLNFDLDRGVFPIVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKQSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSTDSVPP
GFEPISLLEALNGMSSVSPAVPSAPLYDDINFSGGLVGDGRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATAAEDVAESLSPDDEDR
MHSGANILQDCSREHSRLTKTESDPAGDLSLPGSSESTESLKSQSTNCSSQPLLCPTSSL
HMEDEHLNP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctgagtcgcagaatcgctggtgttgaggatatcgatatccaggccaac
tcggcctatcgatttccaccgaaatctgggaactattttgcgagccacttcttcatggga
ggagaaaagtttgacacaccacatccagagggatacctttttggagaaaacatggacctg
aactttcttggaaataggccagtgcagtttccatatgtgacgcctgcaccccacgagcct
gtcaaaaccctgaggagtctcgtcaatataagaaaggactctctgcgtttggtcaggtat
aaagatgactctgacacacctgtggaggaaggtggaaaaccaaaggttcagtatggtgtg
gagttcacctttgatgctgacgctcgggtggccatcaccctctactgccaggcgtttgag
gagttctccaatgggatggcagtgtacagcccaaagaatccctcactggtctctgaaact
gtgcactacaagcgaggagtgagccaacagttctccatgccgtcttttaaaatagatttc
accgagtggaaagaggaagatctgaactttgaccttgaccgaggagtgtttcccatagta
atccaggctgttgttgatgaaggggacgattgcctcggacatgctcacgtacttttggca
gcctttgaaagacacgttgatggcagtttctctgtcaagccactgaagcagaagcaaatt
gtggatcgtgtgagctacctcttgcaggagatctatgggattgaaaacaaaaacaaccag
gaaaccaagcagtcagacgatgagaacagtgacaacagcaacgagtgtgttgtgtgtctg
tccgacctgcgagacactctcatcctgccctgcagacacctgtgtctctgcaactcctgc
gcagacactctgcgttaccaggccaacaactgccccatctgcaggctgcccttcagagcc
ttgctgcagatcagagctgtgaggaaaaagcccggggctctctcccccgtgtccttcagc
cctgtcctggctcagactatggaccatgacgagcactcaagcacggactcggttcccccg
ggctttgagcccatctctctgctggaggctctgaatggtatgagctcagtgtctcctgcc
gtcccatctgcccccctctatgatgacatcaacttctcaggaggtctggtcggcgacggc
agacagctgagctcccccgagcatttgagtgatggcagtctgcagaaaggcaaagtcagc
aagtcacctgacagcacccttaggtctccatcgtctcccatccaggaagaagatgaggag
aagctgtctgagatgtctgatgcacagccacacacactgctgtccagcagccccgccccc
accgacgccacagctgcagaggatgtggcagaatccctgtctccagatgatgaggacagg
atgcattctggggcaaacatcctacaggactgcagcagagaacacagcaggttgaccaaa
acagagagcgacccagcgggcgacttgtctctgccagggtcatcagagtccacagaaagc
ctgaagagtcagagcactaactgctccagccagcctctcctgtgtcccacaagcagcctt
catatggaagatgagcacctcaacccctga
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