Notothenia coriiceps (black rockcod): 104953320
Help
Entry
104953320 CDS
T04920
Name
(RefSeq) tenascin-N-like
KO
K06252
tenascin
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04510
Focal adhesion
ncc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104953320
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104953320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ncc00536
]
104953320
Glycosaminoglycan binding proteins [BR:
ncc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104953320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_2
EGF_Tenascin
DUF4998
Interfer-bind
NDNF
EGF
DUF460
Arylsulfotran_N
hEGF
Motif
Other DBs
NCBI-GeneID:
104953320
NCBI-ProteinID:
XP_010778547
UniProt:
A0A6I9NQ98
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MTSSLLWRALCLLVTLCTVSHFSSATRHPGPSAPEQGVTFSHVYKIDIPGTSSCKLESLP
AQDEAGLQTETTSNGENDITFRHNIRLQTPKCDCEDSESFKSLLYRVNGLEEEVTYLKTA
CTQGCCGGGGAAGVDTSCSGHGTYQPETCSCLCNPGWEGPDCSVSSCPDECNDNGRCVDG
KCVCLQGYTGEDCSQLICPDDCNDKGQCVDGKCVCFPNFTGEDCSIQKCPNDCIGNGQCV
DGQCICEEGFYGEDCSLVIGPQGLRLVQLTDVSLLVEWESVRRAEYYILTYHPKDDESAL
KQVKVPNTENSHLIKKLSPGVTYIVKVYAVIKEIQSEADKLEATTDVSTVDGIRVLGQTE
VSIKVDWKNPRSEVDHFRLTHINPAGQEEELNVKRSQEARTKHTIVGLIPGTEYQISVQA
IKGTSEGKPSSVTGATDIDSPTNLVTTEVTEDTATVSWDRVQAEIQGYMLSYTSADGSSS
DIPVGRESTSYRLVGLKPGVLHTVYIWAFKGDKVSKKSSTEAETELDAPTNFLARDETES
SFRVSWDHTKAEVDGYMLSYSSSEGLSEEIPVGSESTSYVLTGLRP
NT seq
1759 nt
NT seq
+upstream
nt +downstream
nt
atgacttccagtctcctgtggcgggccctgtgcctgctggtgacgctctgcactgtgtca
cacttcagctccgccactcgccaccccggcccctcagctccagagcaaggggtcaccttc
agccacgtctataaaattgacatccctgggacttccagttgtaaacttgagagcctgcca
gcccaggacgaagcaggtctgcagactgagaccacttctaatggggagaacgacatcacc
ttcagacacaacatcaggctgcagacaccaaagtgtgactgtgaggattctgaaagcttc
aagtcacttttgtacagagtcaatgggctggaggaagaagtcacctacctaaagactgcc
tgtacccagggatgttgtggaggtggtggagctgcaggagtggacacgagctgtagtggg
catggtacctaccaaccggagacctgcagctgcctctgtaacccagggtgggaaggccca
gactgctccgtgtcctcctgccctgacgagtgcaatgacaacggtcgatgtgtggatggg
aagtgtgtgtgccttcagggctacacaggcgaggactgtagccagctgatatgtccagac
gattgcaacgacaaagggcaatgtgtggatggcaaatgtgtgtgtttcccaaacttcacc
ggcgaggattgcagcatccagaagtgtcccaacgactgcattggtaacggccagtgtgtg
gatggccagtgcatctgtgaagaaggcttttatggcgaagactgctcattagtcatcggc
cctcagggtctgcggctggtccagctgaccgacgtctctctcctggttgagtgggagtca
gttcgcagggcagagtattacattctgacatatcatcccaaagatgatgagagtgccctg
aagcaagttaaggttcccaacacagagaactcccaccttattaagaagttgagtcctggg
gtcacttacattgtcaaagtttatgccgtcatcaaagaaatccaaagtgaagcagacaag
ctcgaggctaccacagatgtctccactgttgatggtatcagagttcttggccagacagaa
gtctccatcaaggtcgactggaagaacccgcgttctgaggtggatcacttcaggctcaca
cacatcaacccagcaggacaggaggaggagctgaacgtcaagaggagccaagaggcgcgc
accaaacacactattgtcggtctgattccaggaacagagtaccagatatcagtgcaggcc
atcaaaggaacctctgagggaaaaccttcctccgtcacgggagccacagacattgactct
cctactaacttggtcaccactgaagtaacagaggacacggcaacagtgtcatgggatcgt
gtccaggcagaaatccagggctacatgttgagctacacctctgctgatggatccagcagc
gacatcccagtaggacgtgagagcacgtcgtacaggctggtcggcttgaagcctggagtt
ctccacaccgtctacatctgggccttcaagggagacaaagtcagcaagaagagttcaaca
gaagctgagacagagctggatgcccctactaacttcttggcccgagatgagacagagtcc
agcttcagggtgtcctgggatcacaccaaggcagaagtcgatggctacatgctaagctac
agctcctctgagggcttgagtgaggaaatccctgtcgggtctgagagtacttcctacgtg
ctgactggcctcagacctg
DBGET
integrated database retrieval system