Notothenia coriiceps (black rockcod): 104956154
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Entry
104956154 CDS
T04920
Definition
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104956154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ncc04030
]
104956154
G protein-coupled receptors [BR:
ncc04030
]
Frizzled / Smoothened family
104956154
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Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
104956154
NCBI-ProteinID:
XP_010781911
UniProt:
A0A6I9P6G7
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All DBs
Position
Unknown
AA seq
189 aa
AA seq
DB search
MRLGEPSSSETLSCVTIFIIVYYSLMSGVIWFVMLTYAWHTSFKALGTTQQPLSGRTSYF
HMVTWSVPFILTVAILAIAEVDGDSVSGICFVGYKNYKYRAGFVLAPIGVVLVVGGYFLI
RGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEW
ERSFREYVL
NT seq
566 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcggggagccctcgtcttcagagacgctgtcctgtgtcaccatcttcatcatt
gtgtactactccctgatgtcgggtgtgatttggttcgtcatgctgacctatgcctggcac
acgtccttcaaagccctgggcaccacccagcagccactgtccggcagaacctcctacttc
cacatggtcacctggtcggtccccttcatcctcactgtggccatcctggctatcgctgag
gtggatggagactcggtgagtgggatctgttttgtaggctacaaaaactacaaataccgc
gctgggtttgtgctggcccccattggagttgtgcttgttgtcggcggttacttcctcatt
cggggtgtcatgactttgttttccattaagagtaaccacccaggactgctgagtgagaaa
gctgccagcaaaatcaacgagacgatgctgaggctgggtatatttggattcctggctttt
ggctttgttttcatcaccttcggctgccacttctacgatttctttaaccaggctgaatgg
gagaggagctttagagaatatgtgct
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