Notothenia coriiceps (black rockcod): 104956176
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Entry
104956176 CDS
T04920
Name
(RefSeq) apolipoprotein B-100-like
Organism
ncc
Notothenia coriiceps (black rockcod)
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GFIT
Motif
Pfam:
Vitellogenin_N
Vit_open_b-sht
HEAT_2
Motif
Other DBs
NCBI-GeneID:
104956176
NCBI-ProteinID:
XP_010781933
UniProt:
A0A6I9P4Q9
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Position
Unknown
AA seq
759 aa
AA seq
DB search
MEKAATTCPTLVRIAANCPPVSKSASQQNSQWTSLLDLYTPAKNKDAKSPDRPQLRYKSP
KLEQKNQSRPMAQRYKTLHTYEYRYEAESLNAINGASQLRNGPKGSCTVSVEVPQSCSYI
VRTTGCSLSEVVDMDTEGNPVFAPAATSDAFAAEMEKYPLKVVVEGVYDVKLYPEEGETI
TILNIKRGIISALAVPLLEEDKNKNMPTIHGKCKTQSTVNAREDIATDISLNRDLSRCDK
FVPLRDHTSPLALISGMHYPLAQLVRSSQACNYKFDNENKHMTSGSCIENHILIPFSHNG
EHGITNVGKQELTLVQVSPSNERVFDHSGIVKGLHMDAVEDKSAIQDKDAGLNLLRELAS
LPETEGEKRAHLFHVLVSMVRGMKTETLSPAIPEALEVSSALTYQVLVQCGTPECSSAIM
QIFRTFDTSSLKVDSGVFAMGLVSNPSALLINDMLEMAKYKPSKPIMYALSNVVKRFYKA
EGKLIPEIFAVAEFMGSQLGDCSGDKDNTFMTLRVIGNMAAAMGAAGPALRSAVIQCVNQ
PAASLAVQQAAIQAFRLTPVPEEGREILMQVLLDGASPMQKRVAAYLVLMKDPQPTELAQ
LADALPIEQDQQVKSFVISHITNILSSTEPATQELRQKILDALQGNEVGAPMDPTKFSRN
YKIGSVEGNMFFEGSSYLPKEVMLEMTLKAFGYDIDMMEVGMEGNGFEPTVEALFGKNGF
FPDTALETMYFVSENMPLRVNEILQNMLPALKKDRKKRQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagccgccaccacttgtcccacactggtgcggattgctgccaactgtcccccc
gtcagcaagtcagcatcccagcagaactctcagtggacctccctgcttgacctatacact
cctgccaagaataaggatgccaaatctcctgacagaccccagctgaggtataaaagtccc
aagctcgagcagaagaatcagtctcgaccgatggcccaaaggtacaagaccctccacacg
tatgaataccgatatgaagctgaatctttgaatgccatcaacggagcctcacagctcagg
aatggacctaagggctcatgcacggtatcagttgaagtaccccagtcttgcagttacatc
gtccgcaccactggctgtagcctgagtgaggtggtcgatatggacacagagggcaaccct
gtgttcgctcctgcagccacttctgatgcctttgctgctgaaatggagaagtatcctctg
aaggttgtggttgagggagtttacgatgtcaaactgtaccccgaggaaggggagacaatt
actatcctgaacatcaaaaggggaataatttccgccctggctgtgcctctgctggaagaa
gacaagaacaaaaatatgcccaccatccatggcaagtgcaagacccaatccacagtcaac
gcaagagaggacatcgcaactgacatcagcctcaacagggacctgtccagatgtgacaaa
tttgtcccactgagagaccacaccagcccactggcacttatctctggcatgcactatcct
cttgcccagctggtcagaagctcacaggcctgcaactacaagtttgacaatgagaacaaa
cacatgacctctggctcatgcattgaaaaccacatcctcattcccttctctcacaatgga
gaacatggaattaccaacgttggaaagcaagaactgactctggttcaggtctctcctagc
aatgaaagagtatttgaccacagtggtattgtgaaaggtcttcacatggacgctgtcgag
gacaagagtgctatccaggataaagatgcaggtctgaacctcctgagagaactggcctct
ctgcccgagactgaaggtgaaaagagggcccacctcttccacgtgcttgtcagtatggtc
cgtggaatgaagaccgagaccctgagtcccgccattccagaggctcttgaagtgtccagt
gccctgacctaccaggttttggtccagtgtggaacccctgagtgcagcagtgccatcatg
cagatcttcaggacctttgacacctcctcactcaaggttgattccggtgtttttgctatg
ggactggtgtccaatccctctgccctcctgatcaatgacatgctcgagatggccaaatac
aagcccagcaagcccatcatgtacgccctgagcaatgttgtaaagaggttttacaaagct
gaaggcaaactgatccctgagattttcgctgttgccgagttcatgggttcccagttgggt
gactgttctggtgacaaggataacactttcatgacattgagagttattggaaacatggca
gcagctatgggagctgctggtcctgcactcagatctgctgtgatccagtgtgtgaaccaa
cctgctgcttccctggctgtgcagcaggctgccatccaggccttcagactgactcccgtc
ccagaggagggcagagagattctcatgcaagtgcttttggacggcgcaagcccaatgcaa
aagcgtgttgctgcatatctggtactgatgaaagacccccagcccactgaactggcccag
ctggctgatgccctgcccattgagcaggaccaacaagtcaagagctttgtgatctcccat
attaccaacattttgtcctcaactgagccagcaacccaagaactgagacagaagatcctt
gatgcacttcagggcaatgaggtcggggctcctatggaccccaccaagttctctcgcaac
tacaagattggatctgtggaaggcaacatgttctttgagggtagcagctacttacccaag
gaggtcatgcttgaaatgactctgaaggcattcggctatgacatcgacatgatggaggtt
ggtatggagggcaatggatttgagccaactgtggaagctctgtttggaaagaatggattc
ttccccgacactgccctggagacaatgtactttgtctctgaaaacatgccactcagagtc
aatgagatcttgcagaacatgctccctgctctgaagaaggacaggaagaagagacag
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