Notothenia coriiceps (black rockcod): 104960042
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Entry
104960042 CDS
T04920
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104960042
Enzymes [BR:
ncc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104960042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RWD
zf-CCCH_4
zf-CCCH
AAA_22
zf_CCCH_4
Torus
nSTAND3
AAA_19
NB-ARC
zf-CCCH_2
CCD97-like_C
ResIII
T2SSE
Viral_helicase1
AAA_25
GIT_CC
AAA_14
Motif
Other DBs
NCBI-GeneID:
104960042
NCBI-ProteinID:
XP_010786292
UniProt:
A0A6I9PDN0
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
RGGGGGGGGGGGSKGGACVYDDGDDFSLDSGPSRPSRPGRGRGSGGGGRGGGGRGGGGRG
GSSGGGRGGGRGSGSSGGGRDGGRGRDRGKSSSKPLPRSLARTRTSPKPGDSVRPEMSTM
PMQKIFMTTENQEQLKELLRNLQTRDFDEPYDESDSDYSEEEEDEEEIDELDHRDEGQFW
ATTDEPVEKAESPVYLTESSDEERPTPEPVLSLFAIGKLCRYGFDRERGKQALEASGGEF
GSTLEKLLLQIFSERYGQKAVSPDGLEVVPRDECLSQRQEEALALAAIYGERFNERIANT
VWTVTLDLSFLSDNAAKNGRHGRGGDGVVHIRDVCRFFLKGQGCRFGDKCKFKHQLPTKG
RSGSPDSQGPSQPGFSSFSSNEYELEVRFPKGNRYPFQAPIVAFSTTDVSLGAAGRLSVT
EKLFAEALAAAKSNEPVVYTLITMCEDESAIKELLAVQHHKYSTPPPVLVLPRPSVPIAK
SKSVRSNATEDSRSSSANSRRTAPPTNQRHIDLKEKVEAEELDEKDEDDEDDDEEDVPVE
TESYVNLRKKMVNKHNMKIDNMQKENGKLCREFKKKQSSGRFRSMLEQRRKLPAWNEKEN
ILDLLERCQVLVVSGMTGCGKTTQIPQFILDASLGGPADQVVNIICTQPRRISAISVAQR
VAQERAENLGNSVGYQIRLETVRSAATRLLYCTTGVLLRRLESEADLKGVSHVIVDEVHE
RTEESDFLLLVLKDLIMQRPDLKIILMSATLNANLFSEYFFNCPTVHIPGRTFPVDQFFL
EDAISKSG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
agaggtggtggtggtggtggtggcggtggaggtggaagtaaaggaggagcttgcgtctat
gatgacggtgatgatttcagtcttgattccggaccctctcgtccaagcagacctggtaga
ggacggggcagtggaggcggtggccgaggtggcgggggccgaggtggcgggggccgaggt
ggtagcagtggtgggggcagaggtggcggtcgtggtagcggaagcagtggtggcggaagg
gatggaggtcgaggaagagatcgtgggaaaagcagcagcaagcctctcccaaggtccctg
gcgaggacccgaacaagcccaaagccaggtgacagcgtccggccggagatgagcaccatg
cccatgcagaagatcttcatgactactgagaaccaagaacaactcaaggagctgctgcgg
aatctgcagacccgggactttgatgagccatacgatgaatctgattcagattattctgaa
gaagaagaggatgaagaggaaattgatgagttggaccaccgtgacgagggccagttttgg
gccacaactgatgagcctgtggagaaggcagagagcccggtgtatctgaccgagtcgtct
gatgaggaacggcccacccctgaacctgtcctctccttattcgccataggaaaactctgc
aggtatggctttgacagggagcgtggcaagcaggcattggaggctagtggaggggaattt
gggtccactctggaaaagctcctcctccagattttcagtgagcgctacggccagaaagct
gtttcccctgatggccttgaagtggtgcctagggatgagtgtttgagccagaggcaggaa
gaagctctggctctcgctgccatttacggtgagcgcttcaacgagcgcattgccaataca
gtgtggactgtaaccctggacctgtccttcctctctgacaatgcagccaagaatggcagg
catggtcgaggtggtgacggagtcgtccacatccgagatgtctgccggttctttttgaaa
gggcaaggctgtcgctttggggacaaatgcaagttcaagcaccagctccccactaaaggg
agatcaggctccccagactctcagggcccgagccagcctggcttcagcagcttttcctct
aatgagtatgaactagaggtgcgttttcccaaaggaaaccgttacccgtttcaggcacca
atagtcgccttcagcaccaccgatgtgtctttgggggccgcggggaggctcagcgtgacg
gagaaattgttcgcagaagcgttggccgcagcaaagagcaacgaacctgtggtttacacc
ctgatcacaatgtgtgaagatgaatctgccatcaaggaactgctggctgtccagcatcac
aaatacagcacgcctccgcctgtgctggtgctccctcgaccctctgttcccatagcaaag
agtaagagcgtgaggagcaacgctactgaggacagcaggagtagtagtgccaacagcagg
aggacagcaccacctaccaaccagagacacattgatttgaaagagaaagtggaggcggag
gagctggatgagaaggacgaggacgacgaggacgacgatgaggaggacgttccagtcgag
actgagagttacgtcaacctgaggaagaagatggtgaataagcacaacatgaagatcgac
aacatgcagaaagaaaatggcaagctgtgccgggagtttaagaagaagcagtcatcgggg
cgtttcaggtccatgttggagcagaggaggaaactgcccgcttggaacgaaaaagagaac
atcttggacctgctggagcggtgccaggtgcttgttgtcagcgggatgactgggtgtggt
aagaccactcagatccctcagttcattctggacgcctctttagggggtccggcagatcag
gtggtgaacatcatctgtactcagccacgccgaatctctgccatctctgtggcccagaga
gtggcgcaggagcgagcggagaatctcggcaactctgtgggctaccagatccgcctggag
accgttcggtcggctgccaccagactgctgtactgcaccaccggcgtgttactgcggaga
ctggagagcgaggcagacctcaaaggagtatcgcacgtcattgtggatgaggtgcacgag
cgaacagaggagagtgacttcctgctgttggttttaaaagacctgatcatgcagaggcca
gacctgaagatcattctgatgagcgccacacttaatgccaacctcttctctgagtatttc
ttcaactgtcccacggtgcacataccaggtcgtaccttccccgtcgaccagtttttcctt
gaagacgctatctctaaatccgggtaa
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