KEGG   Neoasaia chiangmaiensis: A0U93_15525
Entry
A0U93_15525       CDS       T04705                                 
Name
(GenBank) recombinase RecD
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
nch  Neoasaia chiangmaiensis
Pathway
nch03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    A0U93_15525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nch03400]
    A0U93_15525
Enzymes [BR:nch01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     A0U93_15525
DNA repair and recombination proteins [BR:nch03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A0U93_15525
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 HHH_5 Viral_helicase1 HHH_2 AAA_11 Helicase_RecD nSTAND3 PIF1 NTPase_1 MeaB AAA_16 RsgA_GTPase AAA_29 T2SSE AAA_22 UvrD-helicase DEAD SLFN-g3_helicase AAA_28 ABC_tran AAA ATP_bind_1 ABC_ATPase cobW TsaE IstB_IS21 NACHT MobB AAA_24 MMR_HSR1 AAA_23 NB-ARC HHH KTI12
Other DBs
NCBI-ProteinID: AQS89092
UniProt: A0A1U9KTM6
LinkDB
Position
3343527..3345713
AA seq 728 aa
MSGRAIDSSPTEALAGLVERVTFHNAENGFCVLRVKVRGQRDLVTVVGHAAMISAGEFVQ
ISGRWFNDHSHGLQFKAEFLKASPPTTVEGIERYLGSGMIRGIGPVYAKKLVKAFGEAVF
DLIEQEPHRLREVTGIGPKRAERIVAGWADQKVIREIMLFLHSNGVGTSRAVRIFKTYGQ
DAVKLISENPYRLAKDIRGIGFKTADQIARKMGIAPDAMIRVRAGISYALGEAMDEGHCG
LPVGELLTSTAELLEVAAPLIEMALALELEAGDVIADSVGETGCIFLAGLYRAEQSIAER
LRACAVGRPPWPEIDAAKAMTWVERKTGLALAPSQQEAVRLALRSKVLVITGGPGVGKTT
LVNAILKIVTAKGIDVQLCAPTGRAAKRLSESTGLEGKTIHRLLETDPATGSFNRDDTNP
LTCDLLVVDEASMVDVLLMRSLLRALPDSAALLIVGDVDQLPSVGPGQVLADIIGSGAVP
VVRLTEVFRQAAQSRIITNAHRINEGRMPELSAEEGSDFYFVEAGEPEIGLRRLLAVVKD
RIPARFGLDPVRDVQVLCPMNRGGLGARSLNIELQQALNPPAEVKVERFGWTYGPGDKVM
QIANDYDRDVFNGDLGVIDRIDIEEGELTVSFDGREIVYGFGELDELVLAYATTIHKSQG
SEYPAVVIPLVTQHYAMLARNLLYTGVTRGRMLVVLVGQKKALAIAVRNQGGRRRWSKLR
EWLMGSFA
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgagcgggcgcgccatcgactcttcgcccacggaagcgctggctggcctcgtggagcgg
gtgacgttccacaacgctgagaatggcttctgtgtcctgcgggtgaaggtgcgcggacag
cgcgatctggtcaccgttgtcggccatgccgcgatgatttcggcaggcgagttcgtgcag
atatcggggcgctggttcaacgaccacagccacgggcttcagttcaaggcggaatttctc
aaggccagcccgccgaccacggtcgagggcattgaacgctacctgggctccggcatgatc
cggggcatcggccccgtctatgcgaagaagctggtgaaagcattcggcgaggcggtgttc
gacctgatcgaacaggaaccgcatcgcctgcgggaagtgacgggtatcggccccaagcgc
gccgaacggatcgtcgccggctgggcggatcagaaagtgatccgcgagatcatgctgttt
ctgcacagcaacggcgtcggcacctcgcgggcggtgcgcattttcaagacctacgggcag
gacgcggtcaaactgattagcgaaaatccgtatcgcctggcgaaggacatccgggggatc
ggattcaagaccgccgaccagatcgcccggaaaatggggatcgcgcctgacgccatgatc
cgggtgcgggcagggatctcctacgcgctcggcgaggcgatggatgaagggcattgcggc
cttccggtcggagaactgctgaccagcacggctgaattgctggaagtcgcggcacctctg
atcgagatggccctcgcgctggaactggaagccggtgacgttattgccgacagcgtgggc
gagacggggtgcatcttcctggctggcctgtatcgcgcggagcagagtatcgccgagcgg
ttgcgcgcctgcgccgtcggccgtccgccctggccagagatcgacgctgcaaaggccatg
acctgggtggaaaggaagaccgggcttgctctggcccccagccaacaggaggcggtgcgc
ctcgccctgcgcagcaaggtgctggtgatcacgggtggtcccggcgtaggcaagaccaca
ttggtcaacgccatcctgaaaatcgtgacggccaagggcatcgacgtgcagctttgtgcg
ccgaccggccgcgcggcgaagcgcctgtcggaaagcacggggctggaaggcaagacgatc
catcgcctattggagacagacccggcgaccggcagtttcaatcgggacgacaccaacccg
ctgacctgcgatctgctggtcgtggacgaggccagcatggtcgacgtgctgctgatgcgc
tccctgctacgcgcgttgcctgacagcgcggctctgctgatcgtcggcgacgtggaccag
ttgccgtccgtcggaccgggacaggtgctcgccgacatcattggctccggtgctgtccct
gtggtgcggctgaccgaggtgttccgccaagcggcgcagagccggatcatcaccaacgcg
caccggatcaacgagggcaggatgcccgaactgagtgcggaagagggatcggatttctac
tttgtcgaggctggcgaaccggagatcgggctgcgcaggctgctggcggttgtgaaggat
cgcatcccagcacggttcgggctggacccggttcgcgacgtgcaagtgctgtgtccgatg
aaccggggcgggcttggggcgcggtcgctgaatatcgaattgcagcaggcgctgaacccg
ccggccgaggtgaaggtcgagcggttcggctggacctatggtccgggcgacaaggtgatg
cagatcgccaacgattatgaccgagatgtcttcaacggggatcttggcgttatcgacagg
atcgatatcgaagaaggcgaactgaccgtttcattcgatggacgggagatcgtttacggt
tttggagaactggacgagctggtgctggcctacgcgacgaccattcacaagagccaggga
tcggaatatccggcggtggtcatcccgctggtgacgcagcattacgccatgctggcgcgg
aacctgctctataccggcgtcacacgggggcggatgctcgtcgtgctcgtgggacagaag
aaggcgttggccatcgccgtgcggaaccagggcggcagacggcggtggtcgaagctcagg
gagtggctgatgggtagttttgcatga

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