Neoasaia chiangmaiensis: A0U93_15525
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Entry
A0U93_15525 CDS
T04705
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nch
Neoasaia chiangmaiensis
Pathway
nch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A0U93_15525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nch03400
]
A0U93_15525
Enzymes [BR:
nch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A0U93_15525
DNA repair and recombination proteins [BR:
nch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A0U93_15525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
HHH_2
AAA_11
Helicase_RecD
nSTAND3
PIF1
NTPase_1
MeaB
AAA_16
RsgA_GTPase
AAA_29
T2SSE
AAA_22
UvrD-helicase
DEAD
SLFN-g3_helicase
AAA_28
ABC_tran
AAA
ATP_bind_1
ABC_ATPase
cobW
TsaE
IstB_IS21
NACHT
MobB
AAA_24
MMR_HSR1
AAA_23
NB-ARC
HHH
KTI12
Motif
Other DBs
NCBI-ProteinID:
AQS89092
UniProt:
A0A1U9KTM6
LinkDB
All DBs
Position
3343527..3345713
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AA seq
728 aa
AA seq
DB search
MSGRAIDSSPTEALAGLVERVTFHNAENGFCVLRVKVRGQRDLVTVVGHAAMISAGEFVQ
ISGRWFNDHSHGLQFKAEFLKASPPTTVEGIERYLGSGMIRGIGPVYAKKLVKAFGEAVF
DLIEQEPHRLREVTGIGPKRAERIVAGWADQKVIREIMLFLHSNGVGTSRAVRIFKTYGQ
DAVKLISENPYRLAKDIRGIGFKTADQIARKMGIAPDAMIRVRAGISYALGEAMDEGHCG
LPVGELLTSTAELLEVAAPLIEMALALELEAGDVIADSVGETGCIFLAGLYRAEQSIAER
LRACAVGRPPWPEIDAAKAMTWVERKTGLALAPSQQEAVRLALRSKVLVITGGPGVGKTT
LVNAILKIVTAKGIDVQLCAPTGRAAKRLSESTGLEGKTIHRLLETDPATGSFNRDDTNP
LTCDLLVVDEASMVDVLLMRSLLRALPDSAALLIVGDVDQLPSVGPGQVLADIIGSGAVP
VVRLTEVFRQAAQSRIITNAHRINEGRMPELSAEEGSDFYFVEAGEPEIGLRRLLAVVKD
RIPARFGLDPVRDVQVLCPMNRGGLGARSLNIELQQALNPPAEVKVERFGWTYGPGDKVM
QIANDYDRDVFNGDLGVIDRIDIEEGELTVSFDGREIVYGFGELDELVLAYATTIHKSQG
SEYPAVVIPLVTQHYAMLARNLLYTGVTRGRMLVVLVGQKKALAIAVRNQGGRRRWSKLR
EWLMGSFA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcgcgccatcgactcttcgcccacggaagcgctggctggcctcgtggagcgg
gtgacgttccacaacgctgagaatggcttctgtgtcctgcgggtgaaggtgcgcggacag
cgcgatctggtcaccgttgtcggccatgccgcgatgatttcggcaggcgagttcgtgcag
atatcggggcgctggttcaacgaccacagccacgggcttcagttcaaggcggaatttctc
aaggccagcccgccgaccacggtcgagggcattgaacgctacctgggctccggcatgatc
cggggcatcggccccgtctatgcgaagaagctggtgaaagcattcggcgaggcggtgttc
gacctgatcgaacaggaaccgcatcgcctgcgggaagtgacgggtatcggccccaagcgc
gccgaacggatcgtcgccggctgggcggatcagaaagtgatccgcgagatcatgctgttt
ctgcacagcaacggcgtcggcacctcgcgggcggtgcgcattttcaagacctacgggcag
gacgcggtcaaactgattagcgaaaatccgtatcgcctggcgaaggacatccgggggatc
ggattcaagaccgccgaccagatcgcccggaaaatggggatcgcgcctgacgccatgatc
cgggtgcgggcagggatctcctacgcgctcggcgaggcgatggatgaagggcattgcggc
cttccggtcggagaactgctgaccagcacggctgaattgctggaagtcgcggcacctctg
atcgagatggccctcgcgctggaactggaagccggtgacgttattgccgacagcgtgggc
gagacggggtgcatcttcctggctggcctgtatcgcgcggagcagagtatcgccgagcgg
ttgcgcgcctgcgccgtcggccgtccgccctggccagagatcgacgctgcaaaggccatg
acctgggtggaaaggaagaccgggcttgctctggcccccagccaacaggaggcggtgcgc
ctcgccctgcgcagcaaggtgctggtgatcacgggtggtcccggcgtaggcaagaccaca
ttggtcaacgccatcctgaaaatcgtgacggccaagggcatcgacgtgcagctttgtgcg
ccgaccggccgcgcggcgaagcgcctgtcggaaagcacggggctggaaggcaagacgatc
catcgcctattggagacagacccggcgaccggcagtttcaatcgggacgacaccaacccg
ctgacctgcgatctgctggtcgtggacgaggccagcatggtcgacgtgctgctgatgcgc
tccctgctacgcgcgttgcctgacagcgcggctctgctgatcgtcggcgacgtggaccag
ttgccgtccgtcggaccgggacaggtgctcgccgacatcattggctccggtgctgtccct
gtggtgcggctgaccgaggtgttccgccaagcggcgcagagccggatcatcaccaacgcg
caccggatcaacgagggcaggatgcccgaactgagtgcggaagagggatcggatttctac
tttgtcgaggctggcgaaccggagatcgggctgcgcaggctgctggcggttgtgaaggat
cgcatcccagcacggttcgggctggacccggttcgcgacgtgcaagtgctgtgtccgatg
aaccggggcgggcttggggcgcggtcgctgaatatcgaattgcagcaggcgctgaacccg
ccggccgaggtgaaggtcgagcggttcggctggacctatggtccgggcgacaaggtgatg
cagatcgccaacgattatgaccgagatgtcttcaacggggatcttggcgttatcgacagg
atcgatatcgaagaaggcgaactgaccgtttcattcgatggacgggagatcgtttacggt
tttggagaactggacgagctggtgctggcctacgcgacgaccattcacaagagccaggga
tcggaatatccggcggtggtcatcccgctggtgacgcagcattacgccatgctggcgcgg
aacctgctctataccggcgtcacacgggggcggatgctcgtcgtgctcgtgggacagaag
aaggcgttggccatcgccgtgcggaaccagggcggcagacggcggtggtcgaagctcagg
gagtggctgatgggtagttttgcatga
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