KEGG   Nostocales cyanobacterium HT-58-2: BZZ01_26605
Entry
BZZ01_26605       CDS       T04905                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
ncn  Nostocales cyanobacterium HT-58-2
Pathway
ncn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ncn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BZZ01_26605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncn03019]
    BZZ01_26605
   03009 Ribosome biogenesis [BR:ncn03009]
    BZZ01_26605
Enzymes [BR:ncn01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     BZZ01_26605
Messenger RNA biogenesis [BR:ncn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BZZ01_26605
Ribosome biogenesis [BR:ncn03009]
 Prokaryotic type
  rRNA helicases
   BZZ01_26605
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 HEM4 AAA_19 Flavi_DEAD
Other DBs
NCBI-ProteinID: ARV61716
UniProt: A0A1Y0RQR3
LinkDB
Position
6436921..6438465
AA seq 514 aa
MNLSFLDLGISQERVQQLEKLGFTAPTNIQAQAIPLLLSGRDVVGQSQTGTGKTAAFSLP
IIDRLDVTQKAVQAVVLTPTRELAIQVHDAISDFIGTQGLRVLAIYGGQSIDRQMLQLKR
GVHMVVGTPGRVIDLLDRGSLKLDQVKWLVLDEADEMLSMGFIDDVEKILAQAPQERQTA
LFSATMPPSIRQLVNKFLHSPVTVAVEQPKAAPNKINQVAYLVPRHWTKARALQPILEME
DPESALIFVRTRRTAAELTNQLQAAGHSVDEYHGDLSQQARERLLTRFRNRQVRWVVATD
IAARGLDVDQLSHVINFDLPDSVETYVHRIGRTGRAGKEGTAISLVQPFERRKQQLFERH
IRQSWQVLSIPSRTQIEARQIEKLQNQVREALTGERLASFLPMVSELSEKYDPQAIAAAA
LQIAYDQTRPAWLQSEADLPEEDLIPPTPKPRLRSNRRGEFSGDRTPRSAWVPSDGGTSE
GDKRTPKPKLRTGRRETSASPKKLGSSAARETAS
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgaatctttcgtttctagatttaggaatttcacaagagcgagttcagcaattagaaaaa
ttaggctttaccgcaccaaccaacattcaagcacaagcaattccacttctactatcgggt
cgtgatgttgtaggtcaatcccagactggaacaggaaaaacagcagcattttctctgccg
attatagatcggctagatgtaactcaaaaagctgtgcaagctgtggtactcacacccacc
cgtgagttagccatccaagttcacgatgctatcagtgacttcattggaactcaaggatta
agggttttagcaatctacggtggtcaatcaattgaccgtcaaatgttgcaacttaaacgc
ggcgttcacatggttgtgggtacacccggacgagtcatagacttgctcgacaggggtagt
ttgaagttggaccaagtgaagtggttagtcttagatgaagccgatgaaatgttgagcatg
ggctttatcgacgatgtcgagaaaattctcgctcaagcacctcaagagcgccagacagct
ctattttcagcaactatgccaccttcaatacgccagttggtgaacaagttcttacattcg
ccagtgacagttgctgttgagcagccaaaagccgctcctaacaaaatcaatcaagtcgct
tatcttgtaccacgtcactggaccaaagcaagagctttgcagccaattctagaaatggaa
gatccagaatcggctttaatctttgtccgcaccagacgtacagcagcagaactgaccaat
caactgcaagcagcaggtcacagtgttgatgaataccacggtgatttgtcacaacaagcc
agagaacggttattaacacggttccgtaatcgtcaagtacgctgggtcgtagcaacggat
attgctgcacggggtttagacgttgaccagttgtctcacgttatcaactttgacttaccc
gatagcgtagaaacttacgttcaccgcattggtcgtactggtcgtgctggtaaggaagga
acagcaatttctctggtacagccgtttgagcgacgcaaacaacaactgtttgaacgccat
atccgccaaagttggcaagtgctatcgattccttcacggacacaaattgaagcacggcaa
atagaaaaattgcaaaatcaggtgcgagaagctttaacaggtgagcgtttggcttcattt
ttaccgatggtgagtgaactgagtgaaaaatatgatcctcaagcgatcgcagcagctgcg
ttgcaaatcgcttacgatcaaacccgtcctgcttggctacaatcagaagctgaccttcca
gaagaagatctcataccaccaactcccaaacccagactacggtctaaccgtcgcggcgag
ttttctggcgatcgcacccctcgatccgcttgggttccatcagatggcggcacctcagaa
ggagacaaacgcactcccaagccgaaactgcggacaggacgtcgcgagacttctgcatct
ccaaaaaaactcggttccagtgcagccagagaaacagcttcttag

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