Neurospora crassa: NCU01365
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Entry
NCU01365 CDS
T01034
Name
(RefSeq) ATP dependent DNA ligase domain-containing protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ncr
Neurospora crassa
Pathway
ncr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NCU01365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU01365
Enzymes [BR:
ncr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NCU01365
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NCU01365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
PNKP_ligase
Motif
Other DBs
NCBI-GeneID:
3876864
NCBI-ProteinID:
XP_960717
UniProt:
Q1K6N2
LinkDB
All DBs
Position
V:complement(3780935..3785173)
Genome browser
AA seq
1072 aa
AA seq
DB search
MPFLFSYVCDLLQALDDNQRAKSGLKTTAKIIENWFAKHRSLIDRDDHNDTALLSTLFPE
KRTDRVFRYGPGRLERIIGRGLVLGMTRREELGRHADAKWGMDLAECVERILRDTPNPDP
IRPVTVEEIDNLLHDIASHCHFSSPAVRSSAPSSTPLSREKALGDIYTRFSPRDAKWFTR
LFLKNYRPVILDPQLVYRNYHPRLPLIVKVRDDFVDAGRILASHRQERTVTGRDEFAKHL
KPRLGVKVGRQPWFQARSIKHCLQMDYGRMSCEEKYDGEYCQVHIDLSKGYDCIQIFSKS
GKDSTPDRKALHDAIRKSLNLYQPSCPFKKGCILEGELLVYSDKEEKILDFYKIRKHVSR
SGAFLSTEQDSQRNPWEHLMIVYYDILLVDDESLLAVKHSERMQRLQEIVTEVKGRSMLV
QRQIIDCSRPSAESDLRRAFATCITNRGEGLVLKPDATYFNFDTSVGYSGSIAIKLKKEY
IRRFGDVGDFAVVGARYDPTKAKSFDLPNIKWTHFYIACLGNKEEVVRFGAVPNFVVTNV
VELNETQMRAFMTAIQPVAVDPQDNTAFSLRIEDGVDGKKTPTTIFKVPPVFDIRCFSFD
RPGNTGFWTPRFPMVNKIHCDRTYLDVLSFSELQEMAIHGTQKPPGEESQELLEWVGRLE
QADPKTRGVEIQTQTTASTSQAPSTPNRSPCRDALPPSSPSSSLKCRSVGRDSFTSSASV
AIAIRSPIKTKGRPRLLPTVVESPQSSTNELSTTARGEKRPHSSSTNLECDISKIRKHNN
PEGQKDVSASRRETISSSVVQREPLMAIETTSPRRNPNPRLAAPPRLIGANSMYQPTTLD
MEHRQSTNTRGRVSLPHSMSLGITSCDFRFTVPQPTARPHVSSPPTAIELLTENKCRYLG
DACTIANISFMLSPCIADYLWVTEDLLGYHGITEFARDPKEWAAEQSIPPTGTPTIMPTI
TATTATEAMVLNSSAPTPTPSCTPGGTKRKKKIMLVDRRREEANKVFLQSVRDAGLRHRN
GEPRHVSVYDWRVLEELKEEEERCRESGEWDRVRFDIRRSGSIWRKYWVGLT
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccttttctcgtacgtgtgcgacctcctgcaggcgttagacgacaaccaacgc
gcaaagtctggcctgaagactactgccaaaatcatcgaaaattggttcgccaaacaccgc
tcacttattgaccgcgacgaccacaacgatacagcactcctttccactctgtttcctgaa
aagagaaccgacagggtcttcaggtatggcccgggaaggttggaacgcatcatcggaagg
ggactggtactaggaatgacccgaagggaagaacttgggagacatgcagacgctaaatgg
ggcatggatctcgccgaatgtgttgaacgtattctgagggacacgcccaatcctgatccc
atcagaccagttaccgttgaggagatcgacaaccttcttcacgacatcgcttcgcactgt
cactttagctcccctgcagtgcgtagctcagctcccagttcaacccctctaagccgagag
aaggcacttggagatatctatacgagattctcccctcgagatgccaagtggttcacgcga
ctattcttgaagaactaccggcccgtcattctcgacccgcaactcgtatatcgtaattac
catcctcgattgcccttgatagtcaaagtgcgggatgactttgtggatgctggccgcata
ctggcgagtcacagacaggaacgaacggttactggaagggacgaatttgccaaacacctg
aaacccagattgggtgtcaaagttggccgtcaaccatggttccaggcaagaagcatcaag
cattgcttgcagatggactacggtaggatgagctgcgaggagaagtacgacggcgagtat
tgccaggttcatatcgacctcagtaagggctacgactgtatacaaatattctccaagagt
ggaaaggatagcacaccagaccggaaagctctacatgatgccatccgaaaatcactcaat
ctataccagccatcatgtcctttcaaaaagggatgcatcttggagggagagctactggta
tatagcgacaaggaagaaaaaatattggacttctacaaaattcgaaagcatgtatcgagg
tctggtgcgttccttagcacggaacaggactcacaacgaaacccctgggaacatctgatg
atcgtttactatgacattctccttgttgatgacgagtcgctcttggctgttaaacactcg
gagagaatgcagcgtctccaagaaatagtaacagaggtcaaaggacgctcgatgttggtc
cagcggcagatcatcgactgcagccgaccatccgcggaatcagatctacggcgtgcgttt
gcgacgtgcatcaccaaccgtggagaaggcctggtactcaaacccgacgctacatacttc
aactttgatacgtcggtgggatactctggcagcatagcaattaaactcaagaaggagtat
atccgacggtttggggatgtgggtgattttgctgtggtcggtgctcgttatgacccgacc
aaagcaaagtccttcgaccttccaaacatcaagtggacgcacttttacatcgcgtgtctg
ggcaataaggaagaggtggtgcgcttcggagcagtgccgaatttcgttgttacaaacgtg
gtggaactgaacgaaacgcaaatgcgtgcttttatgacggccatccaaccagtcgccgtg
gatccgcaagacaatactgcattttcgttgaggatcgaggacggggtcgacggcaaaaag
acaccaacaacaatcttcaaagtacccccagtattcgacataagatgtttctctttcgat
agacccggcaatactggattctggactccgaggttcccaatggtaaacaagatacactgt
gacagaacttatcttgacgttctgtctttttcagagttgcaagaaatggcaattcatggg
acacaaaagcccccaggtgaagaaagccaggagctgttggagtgggtcggacgtctggaa
caggcggatcccaaaacaagaggcgtcgagatccagacccaaaccaccgcctcgacaagc
caagccccgtcgacacctaacaggtcgccatgccgggacgctttaccaccttcgtctcca
tcctcctccctcaaatgtcgctcagttggcagggactcgttcacatcgtcagcttcggtg
gccatcgctatcagatcaccgataaagaccaaaggtcgacctcgtcttctgcccacagtg
gttgaatctccgcagagctcaactaacgaactttcaacgacagctagaggggaaaagcga
cctcatagttcatccaccaacctagaatgtgacattagcaagatcagaaaacacaacaac
ccagaaggccagaaggacgtttccgcatcccgaagggagaccatatcctcatcagttgtt
cagcgagagcctctcatggccatcgagactacctcgccacgacgtaatcccaatcctcgc
ttggccgctcctcctcgactcataggcgcgaactccatgtaccagcccactaccctagac
atggagcaccgccagagtacgaatacccggggacgggtttctcttcctcactcgatgtca
ttgggcattacctcttgtgactttaggttcactgtaccccaacctacagccaggcctcac
gttagctctccccctaccgcaatcgaattactgacagaaaacaagtgccgctacctcggc
gatgcatgcacaattgccaatatttccttcatgctctccccctgcatcgccgactacctt
tgggtgacagaggacttgctcggttaccacgggattaccgagtttgcacgcgatcccaag
gagtgggcagcggagcaatccattccccccacgggcacgcccaccataatgcccacaata
acggcaacaaccgccacggaagccatggtcctcaacagctcagcaccaacacccaccccc
tcatgcactcctggtgggaccaagcgcaagaaaaagatcatgctcgtggaccgtagaaga
gaggaggccaacaaggtgtttctccagagcgttagggatgcaggcttaagacatcgaaac
ggcgagccgagacatgtctcggtgtatgattggagggtcttggaggagttaaaggaggag
gaagagaggtgtagggagagtggcgagtgggatagggttaggtttgatatcaggaggagc
gggagtatttggagaaagtactgggttgggttgacttga
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