Neurospora crassa: NCU04611
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Entry
NCU04611 CDS
T01034
Name
(RefSeq) transcription elongation factor spt-6
KO
K11292
transcription elongation factor SPT6
Organism
ncr
Neurospora crassa
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncr03021
]
NCU04611
03036 Chromosome and associated proteins [BR:
ncr03036
]
NCU04611
Transcription machinery [BR:
ncr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NCU04611
Chromosome and associated proteins [BR:
ncr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
NCU04611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
YqgF
SPT6_acidic
Spt6_S1
HHH_9
S1
SH2
HHH_3
Motif
Other DBs
NCBI-GeneID:
3875001
NCBI-ProteinID:
XP_958854
UniProt:
Q8NIV6
LinkDB
All DBs
Position
V:1506268..1511409
Genome browser
AA seq
1407 aa
AA seq
DB search
MSNSMRDLIDGEAELDDEEDDESFDEEAGDRPRRRPNIDDSSEEEEDDEDEEEARKIREG
FIVDEDEEDEAEDSDARERRRRKKRRREREEEEQLDEEDLDLIGEAIPEWERKPQPQQTK
FKRLKRGHRDDHRPTERRGLAEIFSDEDEEHDDRGYGRPSGRAQADEFDDFIEDDYPEDD
EERRHREEDEEVARPKDRGLNIDTTGLDKDALEDMDAIFGNGEDYEWALQLEEEQEHAER
TKEDIELQDVFEPSQLKEKLLTDEDNRIRFNDEPERFQLDRKAFKNLQMTSDQFKEEARW
ISNLMLPSKNLSSELHGPFNKAVGKVLEFFVIDGVEVPYVFQHRRDYLIHAKKMRNPNRR
DDPDAPEYTVDAEKLLTQDDLWKVLDLDIRFRSFLEKRNALEQTYDKLKEKTRDDILEEM
IRQAQSIEELQDLQDYLNFQYSAELKDLAANDNSAQREIKRAGGRTAQFERIRRSNAYKF
VQALGITPDRLAKNILRESSKVTSEDDSRLPDDLADTLVDADFPTGELVINAARQMLAEE
MFASPRMRKHFRKNFYGMGIVSCRRTDKGLRKIDEANPYYEVKYLKNMSIADLAVRPELF
LKMMKAEEEGLIEIKVSLENDREFRQQLFSDFASENFSELADKWNAERQKVIDLAFDKLV
KVIVKGVKDSLRTACQDELLKTCRELYFKRLDQAPYKPKGMVIGTTPRVLTLSNGMGDPN
REPVSWVSMDEDGRILEHGTFTNLARDESQREALAELVRRRQPDVIGISGFSADTHRLIK
DVEGLVSEKGLVGPEYDDPETNEYRSDLLEVIVINDEVARLYKDSPRAVADHPSLNPMTR
YCIALARYMQNPMKEYAALGKDVTSLQIHPYQQYLPQAKLLKHLETAMVDMVNLVGVDIN
VAMQDANTAHLLPYVAGLGPRKAQLLIKGINKNGGVVTSRDELVGDPERHKLPVLGPRVW
NNCASFLFIEYEPTNPESDPLDNTRIHPEDYDLARKVAADALGLDEEDVKAETDENGAGA
IVRKLFKDDEQDKVNELILEEYAEQLEREYQQRKRATLETIRAELQVPYEELRKKFESLT
VDQVFTMLTGENRDSLCEGMIVAANVRVVKDDFAIVKLDCGIEGRIESHDVSYRHSIKDV
LHVGQVVQAKLIDLNRKEFVSKLSMRDEEMRRPFRRHFDHGRDQWDYRKEDEDREELREK
DKSTGRAQRVVNHPLFKPFNSTQAEEYLGSQPSGEVVIRPSSKGNDHLAVTWKVADGVFQ
HVDVLELQKENEFAVGRVLRVGKYTYQDLDELIVDHVKAMAKKVDELMQCDKFQKGSRNE
TEKWLTTYMDANPNRSTYAFCIDTKHPGYFFLCFKASRNSRVNAWPVRVIPHAFELMKSQ
YPDVRALCNGFKLRYQSEMLKQQSGGR
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagcatgcgcgacttgattgacggcgaggccgagctcgatgacgaggaggat
gatgagtcctttgatgaggaggccggcgaccgcccgagaagaagacccaacattgatgat
tccagcgaagaggaggaggacgacgaagatgaggaagaggctagaaagattcgcgaaggt
ttcatcgtagacgaagatgaagaggacgaggccgaggattcggatgcgcgcgaacgccgt
aggagaaagaagcgccgtcgtgagcgcgaagaggaggagcagctcgacgaagaagatctc
gacctgattggtgaagcgattcctgagtgggagcggaagccacaaccccagcaaaccaag
ttcaagcgcctgaaacggggtcatagggatgaccaccgccccactgaacgtcgcggtctt
gccgagatcttttccgatgaggacgaagagcacgatgatcgaggctacggccgtcccagc
ggccgggctcaagcggacgagttcgacgacttcatcgaagatgattaccccgaggatgac
gaagaacgtcgacaccgcgaagaagatgaggaggttgctcgtcccaaggataggggcctc
aacatcgacacaaccggcctcgacaaggatgctctcgaggacatggatgccattttcggt
aatggtgaagattacgaatgggcgttgcagctggaggaagagcaggagcacgcggagcga
acaaaggaagatatcgagttgcaggatgtcttcgaaccttcgcagctcaaggagaagctt
cttaccgacgaggataacaggattcggttcaacgacgagcctgagcgcttccagctcgat
cgcaaggctttcaagaatctccagatgacgtccgatcagttcaaggaggaggctcggtgg
atcagcaacctgatgctacccagcaaaaatctttccagtgagcttcacggtccgttcaac
aaggccgtgggcaaggtcctcgaattcttcgttatcgacggcgtcgaagttccctacgtt
ttccagcaccgaagagactacctcatccacgccaagaagatgcgcaacccgaatcgccgt
gacgatcctgacgctcccgaatatactgttgacgccgagaagctccttacccaagatgac
ctgtggaaggtcctggatctcgacatcaggttccggtctttcctggagaagcgtaacgcg
ctagaacaaacttacgacaagctcaaggaaaagacccgggacgatatccttgaagagatg
atacgccaagcgcagtccattgaggagctccaggatctccaagattacctaaacttccag
tattcggcggagctgaaggaccttgctgccaacgataatagcgcacagcgtgagattaag
agggccggtggcaggacagcccagtttgaacgcatccggcgatccaatgcctacaagttt
gtccaggcactcggaataacgcctgatcgtcttgccaagaacattctgcgcgaaagcagc
aaggtgacctcagaggacgattcaaggctaccagatgacctggccgacacattggtagac
gccgatttcccgaccggcgagttggtcatcaatgctgctcgccagatgcttgctgaagaa
atgtttgccagtcctcggatgcgcaaacacttcaggaaaaatttctacggcatgggcatt
gtgagctgccgtcgtactgacaagggtctacgcaagattgacgaagcaaatccttactac
gaggtcaagtatctcaaaaacatgtctatcgccgatcttgccgttcgcccggagctcttc
ctcaagatgatgaaggcagaggaagaagggctcatcgaaattaaagtttcgctggagaac
gaccgcgaatttaggcaacaactttttagtgatttcgcctcggagaactttagcgagctt
gccgacaagtggaacgcggaacgtcaaaaggtgatcgatttggcctttgacaagctggta
aaggttattgtcaagggtgtgaaagactccttgcggacggcgtgccaggatgagctgctt
aaaacctgccgtgagctttacttcaagagactggatcaagccccttataagcccaaaggt
atggttattggcacgactccccgcgtgctcacgctatcgaatggcatgggcgatcccaac
cgtgaacctgtatcctgggtctcgatggatgaggatggaaggattctcgaacacggtacc
tttaccaacctagctcgcgatgagagtcaacgcgaggccttggctgagctagtcaggcgt
cggcaacctgatgttattggcatctccggtttctcagccgatacacaccgtctcatcaag
gacgttgagggtctcgtcagtgaaaagggactggtcggccccgaatacgatgacccggag
accaacgaatatcgctctgacctgctcgaggtgattgtcatcaacgatgaggtcgcccgg
ctgtacaaggacagccctcgtgcggttgcagatcacccaagcctcaacccgatgacccgg
tactgcattgctctggctagatatatgcagaaccccatgaaggagtatgcggcccttggt
aaggatgtcacgtcacttcaaattcatccctaccagcagtaccttcctcaagcaaagctg
ctcaagcacctcgagacggccatggtcgacatggtcaacctcgtcggtgtcgatatcaac
gtggcgatgcaggacgccaataccgcgcatcttcttccctacgtcgctggtcttggtccc
cgtaaagcacaactgcttatcaagggtatcaacaagaacggcggagttgtcacgtctcgt
gacgagcttgtcggcgaccctgagcgacacaagctccccgtccttggccctcgcgtgtgg
aacaactgtgccagtttccttttcattgagtacgagcctacgaatcctgagtccgacccg
ctagacaacactcgtatccatccagaggattacgatctcgctcggaaggtggcagccgat
gcactgggcctggacgaggaggacgtcaaggccgaaactgacgagaacggtgctggtgct
attgttcgcaagcttttcaaggatgatgagcaggacaaggtcaacgagctcatcctggag
gaatatgccgaacagcttgaacgcgagtaccaacagcgcaagcgtgctacgcttgaaacc
atccgggctgagttgcaggtgccatacgaggagctgcgcaagaagtttgaaagccttacg
gtggatcaggtcttcaccatgctcacgggtgagaaccgcgattcgctctgcgagggcatg
atcgtggcggccaacgttcgggtagtcaaggatgattttgccattgtcaagctggactgc
ggcatcgagggacgcattgagtctcacgatgtttcgtaccgccactccatcaaggatgtg
ctccatgtcggacaggtcgtccaggccaagctcattgatctcaaccgtaaggaatttgtg
agcaaactgtcaatgagagatgaagagatgaggcggccgttccgaagacactttgaccac
gggcgcgatcagtgggattacaggaaggaggatgaggacagggaggagcttcgcgagaag
gacaagagcacgggacgtgcgcagagagtggtcaaccatcctctattcaagcccttcaac
agcacccaggccgaggagtatcttggcagtcagccgtctggcgaggttgtaatccgccct
tctagtaaaggtaacgatcaccttgccgtgacctggaaggtagcggatggtgtgttccag
catgtcgacgtgctggaactacaaaaggagaacgagtttgctgtcgggcgtgtcctccgc
gtgggcaagtacacgtaccaggatctggacgagttgatcgtggaccacgtcaaggccatg
gccaagaaggtggacgagctcatgcagtgcgacaagttccagaagggctcccgtaatgag
actgagaaatggctcaccacgtacatggacgccaaccccaaccggtcgacatacgccttc
tgcatcgacaccaagcaccccggttactttttcctctgcttcaaggccagccgaaactcg
cgagtcaatgcctggcctgtgcgcgtcatccctcatgcgtttgagcttatgaagagccag
tacccagatgttagggccctctgtaacggcttcaagcttcggtaccagagtgagatgttg
aagcagcagtcaggaggcagatag
DBGET
integrated database retrieval system
