Naumovozyma castellii: NCAS_0A14110
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Entry
NCAS_0A14110 CDS
T02233
Symbol
NCAS0A14110
Name
(RefSeq) hypothetical protein
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03030
DNA replication
ncs03410
Base excision repair
ncs03420
Nucleotide excision repair
ncs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCAS_0A14110 (NCAS0A14110)
03410 Base excision repair
NCAS_0A14110 (NCAS0A14110)
03420 Nucleotide excision repair
NCAS_0A14110 (NCAS0A14110)
03430 Mismatch repair
NCAS_0A14110 (NCAS0A14110)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncs03032
]
NCAS_0A14110 (NCAS0A14110)
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0A14110 (NCAS0A14110)
Enzymes [BR:
ncs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NCAS_0A14110 (NCAS0A14110)
6.5.1.6 DNA ligase (ATP or NAD+)
NCAS_0A14110 (NCAS0A14110)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
NCAS_0A14110 (NCAS0A14110)
DNA replication proteins [BR:
ncs03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
NCAS_0A14110 (NCAS0A14110)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
NCAS_0A14110 (NCAS0A14110)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
NCAS_0A14110 (NCAS0A14110)
NER (nucleotide excision repair)
Other NER factors
NCAS_0A14110 (NCAS0A14110)
MMR (mismatch excision repair)
Other MMR factors
NCAS_0A14110 (NCAS0A14110)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Phasin
Motif
Other DBs
NCBI-GeneID:
11529388
NCBI-ProteinID:
XP_003674348
UniProt:
G0V919
LinkDB
All DBs
Position
1:2774465..2776726
Genome browser
AA seq
753 aa
AA seq
DB search
MLRSILAGKKPFIIPKSIMSSPAGFPKKQKQATLAKFFSSMKNEKPADKKDPEDSTTTTT
EKPSLSPYTANSKKTFEEILNRPASNLASSSQGVSDIASTPSIPNISTDESTGPDLKKQK
LEESNLEPSKEPTIENVTQDSTKPYFSSIPYREVCNLFQEIESTSSRLAIIKLCSDFFIK
IMKENPQNLIPVTYLFINKLGPDYEPGLELGLGEGLLMKTISESCGKSLAQVRNKYRELG
DLGQIAMDARNVQPTMFKPKPLTVGEVFENLRLIAKSEGKDSQTRKIKLIKRMLTACEGT
EAKFLIRSLESKLRIGLAEKTVLISLSKALLVHECKDNKDFDMELLETAEQKIRDAFCQV
PNYEIVINSCLKYGIMELETHCSLRPGIPLKPMLAKPTKAINEILDRFQGEIFTSEYKYD
GERAQVHLLSDGTMRIYSRNGENMTERYPEIHIRDFIADPLVTSTLILDCEAVAWDNEQN
KILPFQVLSTRKRKDVDLKDVKVKVCLFAFDILCHNDEKLINKSLRERRQILQEVTKSVT
GEFQYATEMTSSNLDELQKFLDQSVHDSCEGLMVKMLDGIESHYEPSKRSRNWLKLKKDY
LEGIGDSLDLCVIGAYYGRGKRTGMYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQQLY
TRLTPTVLDGPKATFVYDSSAEPDVWFEPTLLFEVLTADLSLSPIYKAGSSTYDKGISLR
FPRFIRTREDKGVEDATSSEQIIELYENQAHTQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggtcaatcctcgcaggtaagaaaccttttattatccctaaatctattatgtct
tctccagcaggatttcccaagaaacaaaaacaggccacactggctaaattcttctcatct
atgaagaatgagaaaccagctgacaaaaaggatcctgaagattcaacaacaacaacaact
gaaaaaccatccttgtcaccttacacagctaatagcaaaaaaacgtttgaagagatattg
aatagaccagcctcaaacctggcatcatcatcacaaggcgtatccgatatcgcttctact
ccatcaataccaaatatatctactgatgaatcaacaggacctgatctaaagaaacaaaaa
ctggaagaatcgaatttggaaccaagtaaagaaccaacaatagagaatgtaacgcaagat
tccacgaaaccgtacttctcttcgataccatatagggaagtctgtaatttattccaagag
attgaatcaacgtcatcacgtcttgcaattattaaattatgctctgattttttcataaag
ataatgaaggaaaatccacagaatttaattccagtaacgtaccttttcattaataaattg
ggaccagattatgaaccaggattagaattaggtttgggtgaaggacttctaatgaaaact
ataagtgagtcatgtgggaaatctttggctcaggtaagaaataaatacagagaattgggt
gatttgggtcaaattgccatggacgccagaaatgtgcaaccaacgatgtttaaacctaaa
cctttgaccgttggagaagtttttgaaaatttaagacttattgctaaatcagagggtaaa
gattctcaaacaagaaagatcaaattaattaagagaatgctaactgcttgtgaaggaact
gaagccaaatttttaattagatcgttggaatcaaaattaagaatcgggttagcagaaaag
actgttttaatttctttatcaaaggccttgttagtccatgaatgcaaggataataaagat
tttgatatggaattattggaaaccgctgaacagaaaattagagacgcattttgtcaagta
cccaattatgaaatcgtcatcaattcctgtttgaaatatggtatcatggaattggagaca
cattgttcgttgagacctggtataccgttgaagcccatgttagctaaaccaacaaaggca
attaatgaaatattggataggtttcaaggtgaaatctttacttctgagtataaatatgat
ggtgaaagggctcaagtacacctactaagcgacggtaccatgagaatttattcacgtaat
ggtgaaaatatgactgaaagatatcctgaaatccatatccgcgatttcattgctgatcca
ttagttacatctactttaatccttgattgtgaggctgtcgcatgggacaatgaacaaaat
aaaattttaccattccaagtactgagtacaagaaaacgtaaggatgtcgatttaaaagat
gttaaagtgaaagtctgtttgtttgccttcgacattttatgtcataatgatgaaaaatta
ataaataaaagtcttagagaaagacgacaaattttacaagaagttactaaatcggtcaca
ggtgagttccaatatgcaacggaaatgacatcatcgaatctggacgaattacaaaaattc
ttggaccaatctgttcatgattcttgtgaaggtctaatggtcaagatgctcgatggtatt
gaatcacattatgaacctagtaaacgttctcgtaactggttgaaattgaagaaggattac
ttggaaggtatcggagattcattagatctatgtgttatcggagcctattacggtagaggt
aaacgtacagggatgtatggtgggttcctgttaggttgttataatcaggacacaggcgag
tttgaaacctgttgtaagattggtactggtttttcagatgaaatgctacaacaattatat
actcgacttacaccaacggttcttgatggaccaaaggcgacatttgtttatgactctagt
gccgaaccggatgtgtggtttgaacctactttattgtttgaagtgcttactgccgatcta
tcgctctctcccatttacaaggccggtagttcgacgtatgacaagggtatctctttgaga
tttcctagatttatccgtaccagagaagacaagggggtggaagatgcaacttcttcagag
cagattatagaattgtatgaaaaccaagcccatacgcaataa
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integrated database retrieval system
