Naumovozyma castellii: NCAS_0B04860
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Entry
NCAS_0B04860 CDS
T02233
Symbol
NCAS0B04860
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03022
Basal transcription factors
ncs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCAS_0B04860 (NCAS0B04860)
09124 Replication and repair
03420 Nucleotide excision repair
NCAS_0B04860 (NCAS0B04860)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0B04860 (NCAS0B04860)
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0B04860 (NCAS0B04860)
Enzymes [BR:
ncs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NCAS_0B04860 (NCAS0B04860)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCAS_0B04860 (NCAS0B04860)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCAS_0B04860 (NCAS0B04860)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
11526313
NCBI-ProteinID:
XP_003674942
UniProt:
G0V9F4
LinkDB
All DBs
Position
2:886528..888852
Genome browser
AA seq
774 aa
AA seq
DB search
MKFYIDDLPVLFPYPKIYPEQYHYMCDLKKTLDAGGNSILEMPSGTGKTVSLLSLTIAYQ
MHYPEHRKIIYCSRTMSEIEKALVELENLMDYRARELGHRENFRGLGLTSRKNLCLHPVV
SKERKGTVVDEKCRRMTNGVAKRKLEQDPNADAELCEYHENLYKMEVGDYLPNGVFSFEK
LIKYCEERTICPYFVVRRMISMCNIMIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNI
DNVCIESLSLDLTNDVLRRATKGANALEERIDDVRKVDAQKLQDEYDKLVEGLHTADILP
VQEEPFVETPVLSKDLLKEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFL
QHLKQLTFIDRKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEDGFLLII
EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFETVLQ
KSYAMTLAKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF
FPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLS
VARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAMR
HAAQCLGRVLRGKDDYGVMVLADRRFSRKRTQLPKWIAQGLSDADLNLSTDMAISNTKQF
LRTMAQPDDPKDQEGVSVWSYDDLMKYQTERKEKQGAHNGVLVDGDQDGDIEMA
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctatatcgatgatctaccagtgctgttcccatatcctaagatatatcctgaa
cagtatcattatatgtgtgatttaaagaagacgttagatgctggtggtaatagtattcta
gaaatgccctccggaacagggaaaaccgtctctttgttgtccctgaccatcgcttaccag
atgcattatccagaacatagaaaaattatttattgttcacgtaccatgtcagaaattgaa
aaggctctagtggaattagaaaatctgatggattacagagctcgtgaattaggccatcgt
gaaaactttcgtggtcttggtctaacgtcaagaaagaacttatgtttacatccagtggtt
agtaaagaaagaaaggggaccgtggtggatgaaaaatgtcgaaggatgacaaatggtgtt
gctaaacggaaattagaacaagacccaaatgctgatgctgagctatgtgaatatcatgag
aacctgtacaagatggaagtgggagactatcttccaaatggtgtattttcgttcgaaaaa
ttgattaaatactgtgaagaaagaactatatgcccatattttgttgttcgtagaatgatt
tccatgtgcaatatcatgatttattcataccattatttattagatccaaagattgcagag
agagtttccaacgaagtttctaaagatagtattgtgatctttgacgaagcacataatatc
gataacgtttgtatagaatcattgtcactagatttaacaaatgatgttcttaggagagct
acgaaaggtgcaaatgcacttgaggaaagaattgatgacgttcgtaaagtggatgctcaa
aaactacaagacgaatatgataagttagtggaaggtctacatacggcagatattctccct
gttcaagaggaaccttttgtagaaactccagttttgtctaaggatttattgaaggaagcc
attcctggcaatattagaagagcagaacatttcgtctcatttttgaaaagactgatagag
tatttgaagacaagaatgaaggtactgcatgtcatttctgaaactccgaagtccttctta
caacatctcaaacaactaacttttatcgataggaaaccgttacggttttgttctgaacgt
ctctctttattagttaggacattagaagtaacagaggtagaagattttacagcattgaaa
gatattgctacattcgcaactctaatttcgacatatgaggatggatttttactcattatc
gaaccttatgaaattgaaaatgctgctgttccaaatccgatcatgaggttcacttgtttg
gatgcatctatcgctatcaagcctgtgtttgagagattctcttccgtaataattacgtct
ggtaccatctccccactagacatgtatccacgtatgttgaattttgaaacagttcttcag
aaatcatatgcaatgactttagcaaagaaatcgtttttacctatgattgtaacaaaaggt
tcagatcaagttgcaatttcttctagatttgaaatcaggaacgatccaagtatagttcgt
aactatgggtcaatgctggttgaatttgcaaagattacgccggatggtatggttgttttc
tttccttcatatctatatatggaaagtattgtttccatgtggcaaacaatgggtatatta
gatgaagtttggaaacataaactaatattggtggaaacaccagatgcacaagagacatca
ttggccttagaaacatacagaaaggcatgctcgaatggtagaggagcaatcttgctatca
gttgcaagagggaaggtctcagaaggtatcgattttgatcatcagtatgggagaactgta
cttatgattggtatcccattccaatacactgaatcacgtatcttaaaggctcgtctagaa
ttcttgagagagaactatcagattagagaaaacgacttcttatctttcgatgcaatgaga
catgcggctcaatgtctgggaagagttttaagagggaaggatgattatggggtcatggtc
ttagctgatcgtagattttccagaaaaagaacgcagttgccaaaatggatagctcaggga
ctgtcagatgccgatttgaatctgtcaacagatatggctatctcaaacacaaaacagttt
ttgaggacaatggcacaaccagatgatccaaaagatcaagaaggtgtctctgtttggagt
tacgatgacctaatgaaataccaaacagaaaggaaagagaagcagggtgcacataatggt
gtgcttgtcgatggcgaccaagatggagatattgaaatggcatag
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integrated database retrieval system
