Candidatus Nitrosocaldus cavascurensis: NCAV_1219
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Entry
NCAV_1219 CDS
T05329
Symbol
rps27ae
Name
(GenBank) putative 30S ribosomal protein S27ae
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
NCAV_1219 (rps27ae)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ncv03011
]
NCAV_1219 (rps27ae)
04121 Ubiquitin system [BR:
ncv04121
]
NCAV_1219 (rps27ae)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncv04147
]
NCAV_1219 (rps27ae)
Ribosome [BR:
ncv03011
]
Ribosomal proteins
Eukaryotes
Small subunit
NCAV_1219 (rps27ae)
Archaea
NCAV_1219 (rps27ae)
Ubiquitin system [BR:
ncv04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
NCAV_1219 (rps27ae)
Exosome [BR:
ncv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NCAV_1219 (rps27ae)
Exosomal proteins of colorectal cancer cells
NCAV_1219 (rps27ae)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S27
Lar_restr_allev
IBR
DUF5795
MqsA_antitoxin
Zn_Tnp_IS1595
DUF1451
zinc_ribbon_13
Motif
Other DBs
NCBI-ProteinID:
SPC34386
UniProt:
A0A2K5ARW0
LinkDB
All DBs
Position
NCAV:complement(1060829..1061059)
Genome browser
AA seq
76 aa
AA seq
DB search
MGKGSNTQVWKYYTVEDDRIRKVRRECPRCGRGVFMAEHSDRVTCGRCKYTEFKRKEKER
VGKGAEEDGKGKRRKQ
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggggagcaacacacaggtatggaagtactacactgttgaggatgataggata
aggaaggtaagaagggagtgtccaaggtgtggtagaggagtattcatggctgagcatagt
gatagggttacatgtggaaggtgcaagtacacagagttcaagcgtaaggagaaggagaga
gtaggtaaaggggcagaggaggatggtaaaggaaagaggaggaagcagtag
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integrated database retrieval system
