Nocardia cyriacigeorgica: NOCYR_1436
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Entry
NOCYR_1436 CDS
T01756
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ncy
Nocardia cyriacigeorgica
Pathway
ncy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NOCYR_1436 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncy03019
]
NOCYR_1436 (recQ)
03400 DNA repair and recombination proteins [BR:
ncy03400
]
NOCYR_1436 (recQ)
Enzymes [BR:
ncy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NOCYR_1436 (recQ)
Messenger RNA biogenesis [BR:
ncy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NOCYR_1436 (recQ)
DNA repair and recombination proteins [BR:
ncy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NOCYR_1436 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
CCF62232
UniProt:
H6R7N8
LinkDB
All DBs
Position
complement(1602309..1604360)
Genome browser
AA seq
683 aa
AA seq
DB search
MRELAGGGARLREDQWTAIEALVVQRRRALVVQRTGWGKSAVYFIAAKLLRTAGRGPTVI
VSPLLALMRNQVAAAERAGVRAATINSGNVTEWDDIHAQVAAGEVDVLLVSPERLNNPDF
RDQVLPKLAADAGLVVIDEAHCVSDWGHDFRPDYRRIRTLIADLGSDVPVLATTATANDR
VVTDVATQIGTDTLVLRGTLDRESLHLSVVRFDDAVERTAWLSRHLGELPGSGIIYTLTV
AAAQDLADVLNSHGHTVAAYTGQTDPAEREMLEAALLNNEVKALIATSALGMGFDKPDLG
FVVHVGAPSSPISYYQQVGRAGRGTDRAEVVLLPGPEDARIWSYFASVAFPREHIVRAVL
AALDTERPQSTAALEPLVELNRSRLEMVLKVLDVDGAVRRVRGGWLSTGQDWVYDSDRYE
RLEAARSAEQQAMIDYQTTTGCRMVFLRGQLDDPGLRTAAPGTADCGRCDNCTGVRPDTA
LDAEAVAATRDRLDRPGIDLAPRKMWPTGMAKLGIPLSGKISEGAETGRVLGRLSALGWG
QRLRALLDGPDEPVPDAVVQACIAVLRDWDWQDRPTAVLALESPTHPVLTASLAARLAEI
GKLRDLGTMRVRPDRPPVSAVNSAHRVAALHDLWELPDLGPIDGPILLVDALTDTGWTFT
AAAHQLRKAGAPAVLPFALATPT
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggagctggccggtggcggggcgcggctgcgcgaggaccagtggaccgcgatcgag
gcgctggtggtgcagcgccgccgcgccttggtggtgcagcgaaccgggtggggaaagtcg
gcggtgtatttcatcgcggcgaagctgctgcggacggccgggcgcgggccgacggtgatc
gtgtcgccgctgctggcgctgatgcgcaatcaggtggcggccgccgaacgcgcgggagtg
cgcgccgcgaccatcaattccggcaacgtcaccgaatgggacgacatccatgcccaggtg
gccgcgggcgaggtcgatgtgctgctggtgagcccggagcggttgaacaatccggacttc
cgcgatcaggtactgccgaagctcgccgcggacgcgggcctggtggtgatcgatgaggcg
cactgcgtgtccgactggggccacgacttccggccggattaccggcgtatccggacgctg
atcgccgatctggggtccgacgttccggtgctggccaccaccgcgacggccaacgaccgc
gtggtcaccgatgtggccacccagatcggcaccgacaccctggtgttgcgcggcaccttg
gaccgtgagtcgctgcacctgtcggtggtgcggttcgacgatgccgtcgagcgcacggcc
tggctcagccgtcatctgggcgagctgcccggctccggcatcatctacacgctgacggtg
gccgcggcgcaggatctggccgacgtgctgaactcgcacgggcacacggtcgccgcctac
accggccagaccgatccggccgagcgcgagatgctcgaggccgcactgctgaacaacgag
gtcaaggcactgatcgcgacgtcggcgctcgggatggggttcgacaaacccgacctcggt
ttcgtggtgcacgtgggcgcgccctcctcgccgatctcctactaccagcaggtcgggcgt
gccggccgagggaccgaccgcgccgaagtggtgttgctgcccggccccgaggacgcgcgg
atctggagctattttgcttccgtcgcctttccccgcgagcacatcgtgcgtgcggtgctc
gccgcgctcgacaccgagcgaccccagtcgacggccgccttggagccgctggtggagctg
aatcggtcgcgcctggagatggtgctcaaggtgctcgacgtcgacggtgcggtgcgccgg
gtgcgcggcggctggctgtccaccggccaggactgggtctacgacagcgatcgctacgag
cggctggaggcggccagatcggccgaacagcaggccatgatcgactatcagacgaccacc
ggctgccggatggtgttcctgcgcggccaactcgacgatcctgggctccggaccgccgca
cccggcaccgccgactgtggccgctgcgacaactgcaccggtgtccggccggataccgcg
ctcgacgccgaagcagtcgcggccacccgcgaccgcctcgaccgacccggaatcgacctg
gcgccacgcaagatgtggccgaccgggatggcgaaactcggtattccgttgtcgggcaag
atctccgaaggcgccgagaccggccgggtgctcggcaggctcagcgcgctcggctggggt
cagcggttgcgcgccctactcgacggcccggacgagccggtacccgacgccgtggtccag
gcctgcattgcagtgctgcgcgactgggactggcaggaccgtcccaccgccgtgctggcc
ctggaatcgcccacacatccggtgctgacggcgagcctcgccgcgcggctggccgagatc
ggcaagctccgcgatctcggcacgatgcgtgtacgtcccgaccggccgccggtatcggcg
gtgaattccgcgcaccgggtggccgcactgcacgacctctgggaactacccgacctcgga
ccgatcgacggcccgatcctgctggtcgacgccctcaccgataccggatggacctttacc
gccgccgcccatcaactccgcaaggccggggccccggcggtactgccgttcgcgctggcc
acgccgacctga
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