KEGG   Nitrospira defluvii: NIDE0764Help
Entry
NIDE0764          CDS       T01281                                 

Gene name
ddlB
Definition
(GenBank) D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
nde  Nitrospira defluvii
Pathway
nde00473  D-Alanine metabolism
nde00550  Peptidoglycan biosynthesis
nde01100  Metabolic pathways
nde01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:nde00001]
 Metabolism
  Metabolism of other amino acids
   00473 D-Alanine metabolism
    NIDE0764 (ddlB)
  Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    NIDE0764 (ddlB)
 Human Diseases
  Drug resistance
   01502 Vancomycin resistance
    NIDE0764 (ddlB)
Enzymes [BR:nde01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     NIDE0764 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:nde01011]
 Precursor biosynthesis
  Amino acid ligase
   NIDE0764 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 ATP-grasp CPSase_L_D2 ATPgrasp_ST RimK ATPgrasp_Ter TTL ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID: CBK40531
UniProt: D8PBC2
LinkDB All DBs
Position
730624..731622
Genome map
AA seq 332 aa AA seqDB search
MKGVDVTEQKPLTRSKIGVLMGGQSSEREVSLKTGEAVYRSLVRSGYDAVAIDVGPDLSK
TLQEQAVEIGFLALHGPGGEDGAIQGFLETLGIPYTGSGVRASAIGMHKVVTKTELAAQG
IPVPRGTVVLRGMAPSLNRVLSTCKLKLPVVVKPASQGSTIGVTIVRKPSQWKEALRTAH
RYDEEAMVEAFIPGHEVTVSLLGGPDGVVTGLPAVEIVAPDGFYDFSAKYEKGRTQYLCP
APLSAAVTRQIKQFAIRTYQALGCSGAARVDFRVTPKGKPFVLEINTVPGMTETSLLPMA
AGKAGLSYDALTERILQSALGRAGVGSFRAVR
NT seq 999 nt NT seq  +upstreamnt  +downstreamnt
atgaagggagtggatgtgacggaacagaagccgctgacgcgttcaaaaatcggagtcctg
atgggcgggcaatcgtctgagcgggaagtgtcgctgaagaccggcgaggcggtctatcgc
tcgctggtgcgaagcggctacgacgcggtggccatcgatgtcgggccggatttgtccaag
acgttgcaggagcaggcggttgagatcgggtttctggcgctgcacggaccgggaggcgag
gacggagcgatccagggatttttggagaccctgggcattccctatacgggatccggtgtc
cgagccagtgccatcgggatgcataaggtggtgaccaagacagaattggccgctcagggc
attccggtcccgcgcgggacggtggtgcttcgcggcatggctcctagtctgaatcgagtg
ctgagcacctgtaagttgaagttgccggtggtcgtcaagccggcgagccagggatccacg
atcggagtgactattgtccggaagccgtcgcagtggaaggaagctcttcgtacggcccac
cggtacgacgaagaagcgatggtcgaggcgtttatcccgggacatgaagtcacggtgtcg
ctgttgggcggccccgacggggtggtgaccgggttgccggccgtggagatcgtggcgccg
gatggattttatgacttctcggccaagtatgagaaaggtcgaacccagtacctgtgcccg
gcgccgctctcggccgcagtcactcggcagatcaagcaatttgcgatccggacctatcag
gccttgggatgcagcggggcagcccgggtcgatttccgtgtcacgcccaagggcaagccg
tttgtgcttgagatcaacacggtgccggggatgacggagacgagcctgctgcccatggcg
gcggggaaggccggattgtcgtacgacgcattgacggagcggattctccagtccgcgctc
gggcgggccggagtcggatcatttcgagccgtgaggtag

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