Nitrospira defluvii: NIDE1125
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Entry
NIDE1125 CDS
T01281
Name
(GenBank) putative Thiamine biosynthesis protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
nde
Nitrospira defluvii
Pathway
nde00730
Thiamine metabolism
nde01100
Metabolic pathways
nde01240
Biosynthesis of cofactors
nde04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NIDE1125
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
NIDE1125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nde03016
]
NIDE1125
Enzymes [BR:
nde01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
NIDE1125
Transfer RNA biogenesis [BR:
nde03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NIDE1125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
HemN_C
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
CBK40884
UniProt:
D8PCC5
LinkDB
All DBs
Position
complement(1098671..1099849)
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AA seq
392 aa
AA seq
DB search
MRCAIVHYHELALKGRNRDFFEQRLVRNLRLALKDLKIRRIESLQGRIRVTIPDEIASDL
VIERLRRTCGVSNFLLTESVPLDLTAPDLTTIKQVAERQLSEQTFNSFRVTAKRADKRLP
LTSMDVEREVGGYLHEVTGKAVKLKQPDLTLHIELLTKEAHIAARKIPGPGGMPVGTSGK
VACLISGGIDSPVAAYRMMKRGCKAVFVHFSGRPLVSRDSEEKVQELVQLLTAYQYHSQL
YIVPFGEIQREIVANAPAAFRVVLYRRIMVRIAEELARRHGCWALVTGDSLGQVASQTPE
NLSVVEAAAELPLLRPLIGMDKIEITEQAQQIGSFTTSIEPDQDCCKLFVPLHPSTRTKP
DDILRIERGLEISTFVKQGVEKAELSTFTFPS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcgccattgtccactaccacgaactcgccctcaaaggtcgcaaccgcgacttc
ttcgagcaacggctcgtccgcaatctcaggctcgcgctgaaggatctgaagatccggcgg
atcgagtcgctgcagggacgcatccgggtaacgattcccgatgaaatcgcgtcggacctg
gtcattgagcgacttcgtcgcacgtgcggagtctcaaactttctgctgaccgaatccgtg
ccgttggatctcacggcgccggatctgacgaccatcaaacaggtcgccgagcggcaactc
tccgaacagacgttcaactcgttccgagtgacggccaaacgagcggataagcgcctgcct
ctgacctcaatggacgtcgaacgcgaagtcggcggctatctccacgaggtgacgggcaaa
gccgtgaagctaaaacagcccgacctgacgctccatatcgagctgctcaccaaagaagcc
catatcgcggcgagaaagatcccaggcccgggcggcatgcccgtgggcaccagcggaaaa
gtggcctgcttgatttccggcggcatcgactccccggtggcggcctaccggatgatgaaa
cgcggctgcaaggcagtcttcgtgcacttctccggacgcccgctggtgagtcgcgattcc
gaagagaaggtccaggagctggtccagctgctgacggcctatcaataccattcgcagctc
tacattgtgcccttcggcgagattcaacgtgagatcgtcgcgaacgccccggccgccttt
cgcgtcgtcttgtatcggcggatcatggtgcgcatcgcggaagaacttgcgcggcgtcat
ggctgctgggcgctggtcaccggcgatagcctcggccaggtcgcttcgcaaacacctgag
aatctgtcggtggtggaggcggccgcggaactcccgcttctgcgcccgttgatcgggatg
gacaagatcgaaattaccgagcaggcgcaacagatcgggagcttcacaacatcgatcgag
ccggatcaagactgctgcaagctcttcgtgccgttacacccgagcaccagaaccaagccg
gacgatatccttcgcatcgaacggggcctggagatcagcacattcgtcaaacagggggtc
gaaaaggccgaactatcgacgttcacctttccttcgtaa
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