KEGG   Nitrospira defluvii: NIDE1985
Entry
NIDE1985          CDS       T01281                                 
Symbol
clpV1
Name
(GenBank) Type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
nde  Nitrospira defluvii
Pathway
nde03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nde00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NIDE1985 (clpV1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nde02044]
    NIDE1985 (clpV1)
Secretion system [BR:nde02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NIDE1985 (clpV1)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 nSTAND3 Sigma54_activat ATPase_2 AAA_25 Zeta_toxin NACHT SLFN-g3_helicase ABC_tran_CTD
Other DBs
NCBI-ProteinID: CBK41709
UniProt: D8PEQ0
LinkDB
Position
1897676..1900405
AA seq 909 aa
MNINLKGLIGKLDDTCRRALEGAAGLCLSRTHYDVDIEHLLSKLLEMSNTDIHKICHHYE
IDHSRFARDLTRSLDRFKTGNARTPTLAPQVPRLINEAWSLASIEYGVNRVRSGHLMLAL
LVEADFARMMRELSPETQKISAEDLHRRLGEIVSGSAEDLEDVQTGGVEQPTTQGAPHAS
RTPALDQFTIDLTARAKQGQIDPVLGRDAEIRQVVDILTRRRQNNPILTGEAGVGKTAVV
EGLALRIVTGDVPPPLQNVTLRVLDLALLQAGAGVKGEFENRLKSVINEVKASPKPIITF
IDEAHTLIGAGGAAGQGDAANILKPALARGELRTIAATTWAEYKKYFEKDPALTRRFQVV
KVEEPTESVAINMMRGLAGTLEEHHKVRLLDEAIEAAVRLSHRYISGRQLPDKAVSVLDT
ACARVALGQVAEPPALEDARRRISLINTEVDILEREAITGGSHQERLAELGREKVAEEQR
LAELRTRWEQEKKVVGEIAGIRKKLEQHAVPPKAPDKPTDKVPDKATKAPPDKAIETPPA
KLTPQEIETLQTDLARLNKELTVLQGETPLLQPCVDGQAIAQVISAWTGIPIGRMVKDEI
NTVLTLKEHLEKRVVGQSHALDALSQRLRTARAKLEDPRRPIGVFMFVGPSGVGKTETGL
ALAELLFGSDQNITTLNMSEFKEEHKVSLLMGSPPGYVGYGEGGVLTEAVRRKPYSVILL
DEMEKAHPGVQDIFYQVFDKGMMKDGEGRDIDFKNTVIIMTSNAGTDTFMKLCADPETRP
DPEALADAIRPDLLKYFKPAFLGRLIVVPYYPISPDIMRRIIELQLSRVRSRIKENHRAV
MSYDEALITAIADRCTEVESGARNVDHILTRTLLPELSTEFLSRMAAGELVNKVHISVEP
GGNFRYEVA
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgaatatcaatttgaaaggactcatcggcaagctcgatgacacctgtcgtcgcgcgttg
gagggcgcggcagggttgtgtctgagccggacccattatgacgtggatatcgagcatctc
ctcagtaaattgctcgaaatgtcgaatacggatatccacaagatttgtcaccactacgag
atcgatcattcgcggttcgctcgagacctcacacgatcactcgaccgcttcaagaccggc
aatgcgaggacgccgaccctggcgcctcaggtcccgcgcctcatcaatgaagcctggtca
ttggcctccattgagtacggagtgaatcgtgtgcggtccggccacctaatgctggccttg
ctcgtcgaagccgattttgcccgcatgatgcgcgagctgtcgcccgagacgcagaagatc
tcagccgaagatctacaccgacggttgggggagatcgtctcgggttcagcggaggatctg
gaagatgttcagacgggaggcgtcgagcagccgacgacgcagggggctcctcatgcttcc
aggaccccggcccttgatcaattcaccatcgatctgacagcgagggccaaacaagggcag
atcgatccggtgctggggcgggatgccgagatccggcaggtcgtggatatcttgacgcgc
cgccggcagaacaatcccattctgaccggagaggccggagtgggaaaaaccgccgtcgtg
gaaggattggcgctcagaatcgtcacgggcgatgtccccccgccgttacaaaacgtcacc
ctgcgggtgctcgaccttgcgttgctccaggccggagcgggagtaaagggggaattcgaa
aatcgcctcaagtcggtcattaacgaagtcaaagcctccccgaaacctattattaccttt
atcgatgaggcgcacaccttgatcggggcgggcggagcagcgggccagggcgatgccgcc
aacattctcaagccggcgctggctcggggagagttgcggacgattgccgccaccacctgg
gccgaatacaagaaatatttcgagaaagatccggcactcaccagacggtttcaggtggtg
aaggtggaagagccgaccgaatccgtcgcgatcaacatgatgcgaggattagccgggacg
ctggaagaacatcacaaggtgcggttgttggatgaggcgatcgaggctgcggtgagactg
tcccatcgatatatttccggccggcaactgccggacaaagccgtcagcgtgctggacacc
gcctgtgcccgagtggccctgggacaggtcgcagagccgccggcgctggaagacgcgcgc
cggcgaatctccctcatcaataccgaggtcgacattctggagcgggaggccatcacgggt
ggaagtcatcaggagcgtctggccgaattgggcagggagaaagtcgcagaagaacagcgt
ctggccgagctcaggaccaggtgggagcaggaaaaaaaggtggttggagagatcgcaggg
atccggaaaaagttggaacagcatgccgtgccaccaaaggctccggacaagccaaccgac
aaggttccggacaaggcaaccaaagcgcctcccgacaaggcgattgaaacgccgcccgcc
aagctgacccctcaggaaatcgagacgttgcaaacagacttggcgaggctgaataaagaa
ctgaccgttctccagggagagaccccgctcctgcagccctgtgtggacgggcaggccatc
gctcaggtgatctcggcctggaccggcattcctatcggacggatggtcaaagacgagatc
aataccgtgttgacgctcaaggagcatttagaaaaacgtgtggtaggacaatcgcatgcc
ctggatgcgctgagccaacgcctgcgaacggcacgggcaaaattggaggatcctcgccgg
ccgatcggggtgttcatgtttgtcggaccaagcggggtggggaagacggaaacgggtctg
gcgctcgccgagttgctgttcggcagcgatcaaaacatcaccaccctgaatatgtccgag
ttcaaggaagagcacaaagtttcgctgttgatgggctcacctccgggctatgtgggctat
ggcgagggaggggtcttgacggaagcggtacgccgaaaaccgtatagcgtgatcctgctg
gacgagatggaaaaagcccatccgggtgtgcaggacattttctatcaggtgttcgacaag
ggcatgatgaaagatggcgaggggcgggatatcgatttcaaaaacaccgtgatcatcatg
acctccaacgcggggacggatacgttcatgaagctctgtgccgatccggagaccaggcct
gatccagaggccctagccgatgcgattcgccctgatctcttgaaatacttcaagccggcc
tttctgggacgactcatcgtggtgccatactatccgatttctcccgatatcatgcggcgc
atcatcgaattgcagctcagccgggtccgcagccgcatcaaggagaaccaccgtgcggtg
atgtcttacgacgaagccctgatcacggcgattgcggaccgctgcaccgaagtggagagc
ggcgcgcggaacgtggatcacattctgacgcggacgttgttgccggaactctcgacggaa
tttctttcacggatggcagcaggggaattggtcaacaaggtccatatctcggtcgagcct
ggcgggaacttccgttacgaggtggcgtga

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