Nitrospira defluvii: NIDE4172
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Entry
NIDE4172 CDS
T01281
Symbol
lpsL
Name
(GenBank) UDP-glucuronate 5'-epimerase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
nde
Nitrospira defluvii
Pathway
nde00053
Ascorbate and aldarate metabolism
nde00520
Amino sugar and nucleotide sugar metabolism
nde00541
O-Antigen nucleotide sugar biosynthesis
nde01100
Metabolic pathways
nde01240
Biosynthesis of cofactors
nde01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
NIDE4172 (lpsL)
00520 Amino sugar and nucleotide sugar metabolism
NIDE4172 (lpsL)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NIDE4172 (lpsL)
Enzymes [BR:
nde01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
NIDE4172 (lpsL)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
KR
NAD_binding_10
adh_short
NmrA
Motif
Other DBs
NCBI-ProteinID:
CBK43840
UniProt:
D8P8K8
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Position
complement(4120748..4121770)
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AA seq
340 aa
AA seq
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MGSGKGLVLVTGAAGFIGSHVSRRLLDRGDTVLGLDNLNDYYDVRLKEARLARLKSHPQF
QFVKLDLSDRAGMAALFEQHAIRRVVHLAAQAGVRYSLVNPHAYTASNVDGFLNILEGCR
HHKAEHLVYASTSSVYGGHTKMPFSVHDNVDHPVSLYAATKKANELMAHCYAHLYRFPIT
GLRFFTVYGPWGRPDMALFLFTKAILEGKPIDVFNHGKMQRDFTYVDDIAEGVLRTLDRP
AQADPAWASDNPDPGSSSAPYRLYNIGNHQPVELLRFIEVLEQTLGMKAQKNFLPLQAGD
VPATYADVADLMRDTGFKPATSIETGIARFVEWYREYYKA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggggtctgggaaaggattagtgctcgtcaccggcgccgccggatttatcgggtctcat
gtgagccggcgattgctcgatcgtggcgacaccgtgctcggtctggacaatctgaatgac
tactacgatgtgcgcctcaaagaagcgcggctcgcacgcctgaagtctcatccccaattt
cagttcgtcaaactggatctgtccgatcgtgcggggatggcggcgctttttgagcagcat
gccattcggcgcgtcgtgcatctggcggcgcaggccggcgtccggtactccctggtcaat
ccgcacgcctacaccgccagtaacgtcgatgggttcctgaacattctcgaaggttgtcgg
catcacaaggccgagcacttggtctatgcctccacgagttcggtgtacggcggccacacg
aagatgccgttctcggtgcacgacaatgtcgatcaccccgtatcgctctacgccgcgacc
aagaaggcgaacgagctcatggcgcattgttacgcgcatctctatcgattcccgattacg
ggattgcggttctttaccgtctacgggccctggggccgtccggatatggcgttgtttctc
tttacgaaggcgattctggaaggcaagcccatcgacgtgttcaatcacgggaagatgcag
cgggactttacctatgtcgatgatatcgccgaaggcgtattgcgcacgctcgatcgtcct
gcgcaggctgatccggcctgggcgagcgacaaccccgaccccggcagcagctccgctccc
tatcgactgtacaacatcggcaatcaccaaccggtcgagttgttgcgatttatcgaggtg
ctggaacagacgctgggcatgaaagcccaaaagaacttccttcctctccaggccggcgac
gtgcctgcgacctatgccgatgtcgcggatctcatgcgcgatacgggcttcaagcctgcg
acctctatcgagaccggcatcgcccgcttcgtagaatggtatcgggagtactacaaggcg
tga
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