Naumovozyma dairenensis: NDAI_0I00140
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Entry
NDAI_0I00140 CDS
T02234
Symbol
NDAI0I00140
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NDAI_0I00140 (NDAI0I00140)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndi03019
]
NDAI_0I00140 (NDAI0I00140)
Messenger RNA biogenesis [BR:
ndi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NDAI_0I00140 (NDAI0I00140)
mRNA degradation factors
5'-3' decay
Decapping complex
NDAI_0I00140 (NDAI0I00140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
11496141
NCBI-ProteinID:
XP_003671826
UniProt:
G0WFM2
LinkDB
All DBs
Position
9:complement(15501..18317)
Genome browser
AA seq
938 aa
AA seq
DB search
MSFFGFDPSGPKSKERNNDGGNKPLDFDDTYGGLGDYEQEEGDYLNAETFGADVELGNDF
DFGHSESNQSGASATIQQPSHVHRSYVAAASQGVSSSNPAQLDTSIDLKPMESLWTAGEQ
EYQQEQQPQQPQVMSMEDIERQQRQMQMAAAAHQQAPSQQGFMQMPPPPHNFPMQGLPPQ
QPYQQDQPNSQFVNQYPPHMIPPPAMQGHPNQFQQMPPMFNHHQSQIPNPNQHYPQMYPT
PPPNFQEHHGQQQQPQLPLQPPQPPQQGNGYSASPQTLPQPQLAHQQVSPPTTTQIQTEL
QPPAGVSRSILASPQSVASPRTESNVTSASPQPLQQEQQEHYQVRSPEQQLPVRNIQKQM
QQRREPLTPEEQKRLQVRHAKVEKIMKHSGVMTPRDKDFITRYQLSQIVTDDPYNEDFYF
QVYKIIQRGGIVGGESNKGSIARAYLEHSGHRLGGRYKRADIALQRMQSQVEKAVTVAKE
RPQKNKDNVEKITGREGVLGKISSAMNSKAPRRQLLIPSHKASRISNEDELQSLLLASSA
SPSTSSLDGTDEHNNSHQPVDAASLANVPALEDVTQHLGNVEISQNSKSRRRSSYAFTSV
DQNSVLSRSGGRKFVLSLIETVYREVLELEANLRSGKEINNTLLWEALHVDDDIYEVCPF
ISMLTFDKGVKIMPRIFNFLDKKQKLKLLQTFFSELSHLNIIIISSYKTNPTPTDNQLKK
IDLFQTVFLKIIVSFLSNNSNFIEIMGLLLHLIKNNNVSFISTSKIGLNLITVLISRAAL
IRQDSNRSNGLSSPEISAWNEIYDKLFTALESKLASVFPPQEYLDKVLKVMDEQQQQHLP
HYNSGNSPSNVQFYDQSYIWQFLASLALSGKLNHQRIIIDEVREEIFGTINAAEELLNSN
EIDKANATYRREKLYQDLNLFLNVMGLVSRDGEISELK
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctttggttttgatccgtctggacctaagtcaaaggagagaaataatgatggc
ggtaacaaaccattggattttgatgatacttatggtggacttggagattatgaacaagaa
gaaggtgattatttaaatgcagagacctttggcgcggacgttgaattagggaatgatttc
gatttcggtcactcagaatcaaaccaatctggagcatcagccaccatccaacaaccaagt
cacgtccatagatcatatgtggctgctgcatctcaaggtgtttcatcttcaaatcctgct
caattggatacttcgattgatttgaaaccaatggaatccttatggactgcaggtgaacag
gaatatcaacaggaacaacaaccacaacaaccacaggttatgtcaatggaagatattgag
agacaacaacgtcaaatgcaaatggctgctgctgcacaccaacaagcaccatcacaacag
ggattcatgcaaatgcctccccctccacataacttccccatgcaaggccttcccccacaa
caaccatatcaacaagatcaaccaaattctcaatttgtaaaccaatatcctcctcacatg
attcctccaccagcaatgcaaggtcatccaaaccaatttcagcaaatgccgccaatgttc
aatcaccatcaatctcaaattccaaatcctaatcaacattatccacaaatgtatccaaca
cctccaccaaacttccaggaacatcatggtcagcaacaacaaccacaattaccattgcaa
ccacctcaaccaccacaacagggaaatggctattctgctagtcctcaaactcttcctcaa
cctcaattggctcatcaacaagtttcgccaccaacaacaacacaaattcaaactgaattg
caaccacctgcaggagtctctcgttccatcttagcttctccacaatctgttgcatctcca
cgtactgaatccaacgtcacttctgcttctccacaaccattacaacaagaacaacaagaa
cattatcaagtaagatcgcctgaacaacaactaccagtaagaaatattcaaaaacaaatg
caacagagaagagaaccattaactccagaagaacaaaaacgtttacaagttcgtcatgct
aaagtggaaaaaatcatgaaacattcaggtgttatgactccacgtgataaagatttcatt
acacgttatcaattatctcaaatcgttacagatgatccctataatgaagatttttatttc
caagtttataaaatcattcaaagaggtggtattgttggtggtgaatcaaacaaaggttcc
atcgcaagagcttatttggagcattcaggtcatagattaggcggtagatataaacgtgct
gatatcgctttacaaagaatgcaaagtcaagtggagaaagctgtcactgtcgcaaaggaa
agacctcaaaaaaataaagataatgtggaaaaaattactggtcgtgaaggggttcttggt
aaaatttcctcagcaatgaatagtaaagctcctcgtagacaattattaatcccatcccat
aaggcaagtcgtatatctaacgaagatgaattacaatctttattattggcttcctcagct
tccccttccacttcttctttagacggaacagatgaacataataattcccaccaacctgtt
gatgctgcttctcttgccaatgtacctgctttagaggatgttactcaacatttgggtaac
gtagaaattagtcaaaattctaagtcaagaagaagatcctcttatgcctttacatctgtt
gatcaaaattctgtgttatctcgttccggtggtagaaaatttgttctttcattaattgaa
actgtttatagagaagtccttgagctagaagcaaacttgagaagtgggaaagaaatcaat
aacactttactatgggaagctttacatgttgatgatgatatatatgaagtttgtccattc
atttcaatgttgacttttgataaaggtgtcaagataatgccacgtattttcaatttctta
gataagaaacaaaaattgaaattactacaaactttcttcagtgaattatctcatttgaat
attattattattagttcatacaagacaaatccaactccaactgataatcaattgaagaaa
attgatcttttccaaactgtctttttgaaaattattgtatcatttttgtcaaataattca
aatttcattgaaattatgggactattattacatttaattaaaaataataacgtttcattt
atctcaacttccaagattggtttaaatttaattacagttttaatttctcgtgctgcttta
ataagacaagattcgaatagaagtaatggattgtcttcgcctgaaatttccgcatggaat
gaaatttatgataaactgtttactgctctagaaagtaaattagcatctgtattcccacca
caggagtatctcgataaagtactgaaagttatggacgaacaacagcaacaacatctacct
cattataacagtggcaattcaccttctaatgttcaattttatgaccaatcatatatttgg
caatttttagcttcattggctctaagtggtaaattaaatcatcaaagaataataattgat
gaagtaagagaagaaatctttggtacaatcaatgctgctgaagaattactcaacagtaat
gaaattgataaagcgaatgctacctatagacgtgaaaaactatatcaagatctgaatttg
ttcttaaatgtcatgggattggtttcacgagatggtgaaatatcagaattgaaataa
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