Nocardioides dokdonensis: I601_2821
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Entry
I601_2821 CDS
T04431
Name
(GenBank) Putative HTH-type transcriptional regulator
Organism
ndk
Nocardioides dokdonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
GerE
AAA_22
TPR_12
HTH_38
NACHT
HTH_30
HTH_23
BrxC_BrxD
DUF5588
TsaE
Motif
Other DBs
NCBI-ProteinID:
ANH39237
UniProt:
A0A1A9GLN6
LinkDB
All DBs
Position
complement(2949436..2952183)
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AA seq
915 aa
AA seq
DB search
MYRVLVGRESERRTIATVLAAARVADSRALVLAGEAGIGKTALLQEARSLAGEMRVLSAQ
GVDSERYVPFAGLLQVLRPVLGLLEDIPAAQRTALASALALGPVPDQEPSRFAVGAATLS
LVARAAEDRPLLLLVDDAHLLDAPSAEALVFAARRMLSDAVAVLVAVRPDEPGARVLDSL
PVLLVPGLDMAAAGSLLATAGDPVARERLQRLHQVTAGNPLALLELCDQLERLDDLPPSA
PVPVPEQVTRSFLRRVSGLPRAARTTLTVAAADPSSLRTVLMAARRIGVRDPTLASAQDA
GLVTLAGDAIEFRHPLVQAAVYADAEPALRREVHRALAHVVDPTDVHRLTWHLSEGAAGP
DEETAALLERVASEAAARSAHTIAMHAYERAAVLSLDPGLVPRRLASAGEAAWLGGRTDR
ATELLGEALSARPAPLLRAHVQELQGAVQLRAGSVDLALQILTRAAIAVAPLEPERAVRI
NADVVHAAFYLMDPGAAMEACRRIDRLLAGDISPATRLLGRSASGMAMVLAGAGAAGVDR
LREAAYRLVVPDPPAAERFRLPLRLQGALWLRGTGPEREVVADTLESMREDAAVALLPYL
LMQVARDAATSDRWDVAESSYHEAARLAQEIGLTTDFAVSVAGLAIVEARRGRAGAVAEH
VEAAGELAARNGVRLATVWLAFAQGDLAAGSGDLESAAEHYTGLEELLAATGLSDPDQSC
APELVECLVHLRRGPQAVEVAAGFASRAAAKGQSWSLARSARAAALCADDPEPDYREALE
LHAETPDGYEAARTRLAYGAWLRRARRRVDARPLLVSALETFDRLDATPWADRAARELAA
TGETVQRDGAGTRVELTPQERQIALLLAQGRTTRQAAAGLFLSPKTVEYHLRHVYLKLGI
SSRAELAERFTGRGE
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgggtgctggtcggacgcgagtccgaacgacggactatcgccaccgtgctcgcc
gctgcgcgagtggccgacagccgcgccctggtgctcgccggcgaggccgggatcggcaag
accgcgctgctgcaggaggcccgctcgctggccggggagatgcgcgtgctgagcgcccag
ggcgtcgactccgagcgctacgtcccgttcgccgggctgctccaggtgctgcgtcccgtg
ctcggcctgctcgaggacatccccgccgcccagcgcaccgccctcgcctcggcgctcgcg
ctgggaccggtgccggaccaggagccgagccggttcgccgtcggcgcagccacgctgagc
ctggtggcccgagccgccgaggaccgacccctgctgctgctggtcgacgacgcccacctg
ctggacgcgccgtcggccgaggcgctggtcttcgctgcccgccggatgctctccgacgcg
gtcgcggtgctcgtcgccgtccgtcccgacgaaccaggtgcccgggtgctcgactccctg
cccgtcctgctggtgccggggctcgacatggcagcggccgggtccctgctggccacggcc
ggggaccccgtggcgagggagcggctgcagcggctgcaccaggtcactgccggcaacccg
ttggcgctgctcgagctgtgcgaccagctggagcgcctcgacgacctgcccccctcggca
cccgtcccggtccccgagcaggtgacccggtccttcctgcgccgggtcagcgggctcccc
cgggcggcccggaccacgctgacggtggccgccgcggaccccagcagcctgcgcacggtg
ctgatggccgcgcggcggatcggggtgcgggacccgaccctggcctcggcccaggacgcc
gggctcgtcacgctggcaggcgacgcgatcgagttccgccatcccctcgtgcaggccgcg
gtgtacgccgatgctgagcctgcgctgcgccgggaggtgcaccgcgccctggcccacgtc
gtggaccccaccgacgtgcaccgcctgacctggcacctctcggagggcgcagcggggccg
gacgaggagaccgctgcgctgctcgagcgggtggcctcggaggccgccgcacgcagtgcc
cacacgatcgcgatgcacgcctacgaacgagccgcggtgctctcgctcgatcctgggctg
gtgccccggcgactggcgagcgccggcgaggcggcgtggctggggggacgcaccgaccgg
gccaccgagctcctcggcgaggcgctcagcgctcggccggcgccgctgctgcgcgcccac
gtgcaggagctgcagggcgcggtccagctgcgcgccggctccgtggacctggcgctgcag
atcctcacgcgcgcggccatcgcggtcgccccgctcgagccggagcgggcggtccggatc
aacgccgacgtcgtgcacgcggccttctacctgatggaccccggtgctgcgatggaggcg
tgtcgtcgcatcgaccggctgctggccggtgacatctccccggcgacccggctgctgggc
aggtcggcgtccgggatggcgatggtcctcgcgggcgccggcgctgcgggcgtggaccgg
ctgcgcgaggcggcgtaccggctggtggtgccggaccctccggccgccgagcgcttccgc
ctgccgctgcggctgcagggcgcgctgtggttgcgaggcaccggaccggagcgcgaggtg
gtggccgacacgttggagtcgatgcgcgaggacgccgccgtcgcgctgctgccctacctg
ttgatgcaggtggcccgcgacgccgccaccagcgaccgctgggacgtggccgaatcgagc
taccacgaggccgcgaggctggcccaggagatcggtctgaccacggacttcgcggtgtcc
gtggccgggctcgccatcgtcgaggcccgccgcggacgcgccggtgccgtggccgagcac
gtcgaggcggccggagagctggctgcgcggaacggggtgcggctggccaccgtctggctg
gccttcgcccagggggacctggcggccgggtccggggacctggagtcagcggccgagcac
tacacggggctcgaggagctgctggccgcgaccggcctgagcgaccccgaccagtcctgc
gccccggagctggtcgagtgcctggtgcacctgcgacgtggaccgcaggcggtggaggtg
gccgccggcttcgcctcccgggcagcggccaagggacagtcctggtcgctggcccgctcc
gcccgagccgccgcactgtgcgccgacgacccggagccggactaccgcgaggcgctcgag
ctgcacgccgagaccccggacggctacgaggcggcgcgcaccaggctggcgtacggcgcc
tggttgcggcgcgcgcgccggcgggtcgacgcccggccgctgctggtctcggccctggag
accttcgaccgtctcgacgcgacgccgtgggccgaccgtgcggcccgggagctggccgcc
accggtgagacggtgcagcgcgacggcgccggcacccgggtggagctcacgccccaggag
cgccagatcgcgctgctcctggcccaggggcgcaccacgcgccaggcggcggcggggctg
ttcctcagcccgaagacggtggagtaccacctgcgccacgtctacctgaagctgggcatc
agctcgcgggccgagctcgccgagcggttcaccggccggggagagtga
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