Nocardioides dokdonensis: I601_3520
Help
Entry
I601_3520 CDS
T04431
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I601_3520 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndk03400
]
I601_3520 (uvrB)
DNA repair and recombination proteins [BR:
ndk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I601_3520 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I601_3520 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_16
AAA_5
AAA
nSTAND3
P-loop_SecA
fvmX5
Motif
Other DBs
NCBI-ProteinID:
ANH39926
UniProt:
A0A1A9GPB6
LinkDB
All DBs
Position
complement(3686183..3688321)
Genome browser
AA seq
712 aa
AA seq
DB search
MRPVTDLERRVAPFKVVSDYEPAGDQPAAIKEITKRINGGEQDVVLLGATGTGKTATVAW
VAEQVQRPLLVLQPNKTLAAQFANELRMLFPDNAVEYFVSYYDYYQPEAYVPQTDTYIEK
DSSINEEVERLRHSATNSLLTRRDVIVVSTVSCIYGLGTPQEYVDRMLRLRVGEERDRDS
ILRQLVEIQYTRNDMSFTRGTFRVRGDTLEIFPVYEEHAVRIEFFGDEIERLMSLHAVTG
EVITEDNELYVFPATHYVAGPERMERAIRGIELELEEQLATFEKQGKLLEAQRLRMRTTY
DVEMMRQVGSCSGIENYSMHMDGRSRGSAPNCLLDYFPEDYLLVVDESHVAVPQIGGMYE
GDMSRKRNLVDHGFRLPSAMDNRPLKWEEFVERIGQTIYLSATPGDYELDKAGGSTPPHV
VEQIIRPTGLIDPEVVVKPTKGQIDDLIHEIRTRAEKNERVLVTTLTKKMSEDLTDYLLD
AGIRTRYLHSEVDTLKRIELLRDLRLGQYDVLVGINLLREGLDLPEVSLVSILDADKEGF
LRSDKSLIQTIGRAARNVSGQVHMYADKITRSMEAAIDETNRRREKQVAYNTAHGVDPMP
LRKKIADITEMLAREDESTQALLETWAGTAAKGRAGGVKAKQPVPALTSKDAGMHAKELA
GMPSADLAQLIQDLTDQMRTAATELQFELAARLRDEIEELKKELRQMMEATK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgtcacagatctcgagcgccgggtggcgcccttcaaggtcgtctccgactac
gagcctgctggtgaccagccggccgccatcaaggagatcaccaagaggatcaacggcggc
gagcaggacgtcgtgctcctcggcgccaccggcaccggcaagacggccaccgtcgcctgg
gtcgccgagcaggtccagcgcccgctgctggtgctgcagccgaacaagacgctggccgcc
cagttcgccaacgagctgcggatgctcttccccgacaacgccgtcgagtacttcgtctcc
tactacgactactaccagcccgaggcctacgtgcctcagaccgacacctacatcgagaag
gactcctccatcaacgaggaggtggagcggctgcggcactccgcgaccaactcgctgctg
acccggcgcgacgtgatcgtggtcagcaccgtgtcctgcatctacggcctgggcaccccg
caggagtacgtcgaccggatgctgcggctgcgggtgggggaggagcgcgaccgcgactcg
atcctgcgccagctcgtcgagatccagtacacgcgcaacgacatgtccttcacccggggc
accttccgggtccgcggcgacaccctcgagatcttcccggtctacgaggagcacgcggtg
cgcatcgagttcttcggtgacgagatcgagcggctgatgtcgctgcacgcggtcaccggc
gaggtgatcaccgaggacaacgagctctacgtcttccccgcgacccactacgtcgccggc
cccgagcggatggagcgcgcgatccgcgggatcgagctcgagctcgaggagcagctggcg
accttcgagaagcagggcaagctgctcgaggcccagcggctgcggatgcgcacgacgtac
gacgtcgagatgatgcggcaggtcgggtcctgctcaggcatcgagaactactcgatgcac
atggacgggcgcagccgcggctccgcgcccaactgcctgctcgactacttccccgaggac
tacctcctcgtcgtcgacgagtcgcacgtcgcggtgccccagatcggcggcatgtacgag
ggcgacatgtcgcgcaagcgcaacctggtcgaccacggcttccggctgcccagcgccatg
gacaaccggcccctgaagtgggaggagttcgtcgagcggatcgggcagacgatctacctc
tccgcgacccccggcgactacgagctggacaaggcgggcggctcgacgccgccgcacgtc
gtcgagcagatcatccgaccgaccggcctcatcgaccccgaggtcgtcgtcaagccgacc
aagggccagatcgacgacctgatccacgagatccgcacccgcgccgagaagaacgagcgg
gtcctggtcaccacgctgaccaagaagatgtccgaggacctcaccgactacctgctcgac
gccggcatccggacccgctacctgcacagcgaggtcgacacgctcaagcgcatcgagctg
ctgcgcgacctgcggctgggccagtacgacgtgctcgtcggcatcaacctcctgcgcgag
ggcctcgacctcccggaggtgtcgctggtctcgatcctcgacgccgacaaggagggcttc
ctgcgctcggacaagtcgctgatccagacgatcggccgcgcggcgcgcaacgtgtccggc
caggtgcacatgtacgccgacaagatcacccggtcgatggaggccgcgatcgacgagacc
aaccgtcgtcgcgagaagcaggtcgcctacaacaccgcccacggcgtcgacccgatgccg
ctgcgcaagaagatcgccgacatcaccgagatgctggcccgcgaggacgagagcacccag
gcgctgctcgagacctgggccggcacggcggcgaagggccgtgcgggcggggtcaaggcc
aagcagccggtgcccgcgctgaccagcaaggacgccgggatgcacgccaaggagctggcc
gggatgcccagcgccgacctcgcgcagctcatccaggacctcaccgaccagatgcgcacc
gccgccacggagctgcagttcgagctcgcggcccggctgcgcgacgagatcgaggagctg
aagaaggagctgcgccagatgatggaggccaccaagtag
DBGET
integrated database retrieval system
