Nocardioides daphniae: E2C04_01985
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Entry
E2C04_01985 CDS
T05939
Name
(GenBank) helix-turn-helix transcriptional regulator
Organism
ndp
Nocardioides daphniae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
TPR_7
TPR_12
TPR_2
HTH_38
VMAP-M18
Sigma70_r4
TPR_19
Motif
Other DBs
NCBI-ProteinID:
QCC76285
UniProt:
A0A4P7UAF0
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Position
403302..405653
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AA seq
783 aa
AA seq
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MRRQVAEWSRLRVDRFQLDPLDAGEVRDLVRALRPAQLTGADLSEAQVADIVARAEGNAF
FVEELVGAAATCDGVPGELADVLMVRLDGLDDDAQQAVRTAAVAGRRVTHGLLATVSGLA
PERLDRALREAVERHVLEPGGGDSYSFRHALLAEAVYDDLLPGERIRLHAAYARCLASGD
VVGTAAELARHARLGQDLPTALAASIEAGDEAMRVGGPDEAALHYQQALELVDHPSLRDA
DVDRADLTIRAARALTGAGHTERGNALLRATIAALPADASAVDRGLLLSELAMGLFLADL
GDEDVALAAESVELLAGGSEVQLARAMSTQARILSGHRREAEAREVATTALAMAQRLDMP
RLSTDLLTTIAGLRVYQLGDDVRDAFSEAVVHARTTGAVNAELRALYGLARLHQDRAEFD
EAIAVFDTARARGIQAGTRWAPYAFDALVMTVQVLLAQGRWDEALARLDAEERAPSALLD
GVLRMLRLLVAAPRGEEGAQAEGAALHRFWQEENVVGLHVAGAELELAEQRADAAAALAT
YDEVVDVIGTTWRELFQARLRLAALALGVLGTAARQQSAVERAVHGERAARLLDDGLRVC
ANDRAQGVVLGPESLAWEKRLVAEHLRWRWIAQSEPPSAAELREAWEEAVAAFEAYGAVH
ELARARARLVEVLLAQGETAAAGALRDQVAATARELRTPALLNGLGVAPGRGPREARPAS
ALTAREREILALVAQGRSNGEIGSQLFIATKTVSVHVSNILGKLGATSRTEAAAVARREG
LLD
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
ttgcgccgtcaggtcgccgagtggtcgcggctgcgggtcgaccgtttccagctcgacccg
ctggacgccggcgaggtccgcgacctggtccgcgcgctccgccccgcgcagctcaccggc
gccgacctctccgaggcccaggtcgccgacatcgtggcccgcgccgagggcaacgccttc
ttcgtcgaggagctggtgggcgctgccgcgacctgcgacggcgtgcccggcgagctcgcc
gacgtgctcatggtgcgcctcgacgggctcgacgacgacgcgcagcaagccgtgcgtacg
gccgcggtcgccggccggcgggtcacccacggcctcctcgccaccgtctccggcctcgct
cccgagcggctcgaccgcgccctgcgcgaggccgtcgagcgccacgtcctcgagcccggc
ggcggagactcctactccttccgccacgccctgctggccgaggccgtctacgacgacctg
ctcccgggcgaacgcatccggctgcacgccgcgtacgcccggtgcctggcctccggcgac
gtcgtcggcaccgcggcggagctcgcccgccacgcccggctcggccaggacctgccgacc
gccctggccgcctcgatcgaggccggcgacgaggcgatgcgcgtcggcgggcccgacgag
gccgcgctacactaccagcaggcgctggagctggtcgaccacccgtcgctgcgcgacgcc
gacgtcgaccgggccgacctcaccatccgtgccgcgcgggccctgaccggtgccggccac
accgagcgcggcaacgcgctgctgcgggccacgatcgccgcgttgcccgccgacgcctcc
gccgtcgaccgggggctgctgctctccgagctcgcgatgggactcttcctggctgatctc
ggggacgaggacgtcgccctcgccgcggagtcggtggagctgctcgccggcggcagcgag
gtgcagctcgcccgggccatgtcgacgcaggcgcggatcctctcggggcaccgccgcgag
gccgaggcgcgggaggtcgccaccaccgcgctggcgatggcccagcgtctcgacatgccg
cggttgagcaccgacctgctcaccaccatcgccgggctgcgggtctaccagctcggtgac
gacgtgcgcgacgccttctccgaggccgtcgtccatgcgcggaccaccggcgcggtcaac
gccgagctgcgggcgctctacggcctcgcccggctgcaccaggaccgcgcggagttcgac
gaggcgatcgccgtcttcgacacggcccgagcgcgggggatccaggccggcacgcgctgg
gcgccgtacgccttcgacgcgctcgtgatgaccgtccaggtcctgctggcccagggtcgc
tgggacgaggcactggcccggctcgacgccgaggagcgcgccccgtcggcgctgctcgac
ggggtgctgcggatgctccggctgctcgtcgcggcccctcggggcgaggagggcgcgcag
gccgagggggcggcgctgcaccgcttctggcaggaggagaacgtggtcgggctccacgtc
gcgggggccgagctcgagctggccgagcagcgcgccgacgccgctgccgcgttggcgacg
tacgacgaggtcgtcgacgtcatcggcaccacctggcgcgagctcttccaggcgcggctg
cgtctggctgccctggcgctcggcgtgctcggcaccgccgctcgccagcagagcgcggtc
gagcgcgccgtccacggggagcgcgctgcccgcctgctcgacgacggactgcgcgtctgc
gccaacgaccgcgcccagggcgtggtcctcgggcccgagtcgctcgcctgggagaagcgg
ctggtcgccgagcacctgcgctggcggtggatcgcccagtccgagccgccctccgccgcc
gagctgcgggaggcgtgggaggaggcggtggccgccttcgaggcctacggcgccgtgcac
gagctggcccgcgcccgagcacgcctcgtcgaggtgctgctggcgcagggcgagaccgcc
gcggccggagcgctgcgcgaccaggtcgccgcgaccgcgcgcgagctgcgtacgcctgcc
ctcctcaacggactcggcgtcgcgcccggccgggggccccgggaggcgcgaccggccagc
gcgctcaccgcgcgcgagcgggagatcctggcgctcgtcgcccaggggcgcagcaacggc
gagatcggcagccagctcttcatcgcgaccaagacggtcagcgtccacgtctccaacatc
ctgggcaagctcggggcgacctcccgcaccgaggcagccgcggtggcgcgccgcgaaggc
ctgctcgactga
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