Nocardioides daphniae: E2C04_05225
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Entry
E2C04_05225 CDS
T05939
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ndp
Nocardioides daphniae
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndp03019
]
E2C04_05225
03009 Ribosome biogenesis [BR:
ndp03009
]
E2C04_05225
Messenger RNA biogenesis [BR:
ndp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E2C04_05225
Ribosome biogenesis [BR:
ndp03009
]
Eukaryotic type
Pre-60S particles
RNases
E2C04_05225
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QCC76772
UniProt:
A0A4P7U9M4
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All DBs
Position
complement(1055003..1055650)
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AA seq
215 aa
AA seq
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MNDRLVWIDCEMTGLDLEKDALIEVAALVTDFELNVLGEGVDVIIKPPAESLETMIDFVR
DMHQKSGLLEELDGGVTMEEAEAQVLAYIREHCPEGSRPPLAGNTIGTDRAFLARDMAGL
EGFLHYRNIDVSSIKELSKRWFPRAYFQAPEKRGNHRALADIQESIEELRYYREAVFVTP
PGPDSSTAKEIAARHAGSVTGLQGGASTPDSTPGA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaccgactggtgtggatcgactgcgagatgaccggcctcgacctcgagaaggat
gccctgatcgaggtggccgccctggtgaccgacttcgagctcaacgtgctcggcgagggg
gtcgacgtcatcatcaagcccccggcggagtcactcgagacgatgatcgacttcgtccgc
gacatgcaccagaagtccggcctgctcgaggagctcgacggcggcgtcaccatggaggag
gccgaggcccaggtcctcgcctacatccgcgagcactgccccgagggcagccgtcccccg
ctggccggcaacacgatcggcaccgaccgcgccttcctggcccgcgacatggccgggctc
gagggcttcctgcactaccgcaacatcgacgtctcctccatcaaggagctctccaagcgc
tggttcccccgcgcctacttccaggcgccggagaagcgcggcaaccaccgcgctctcgcc
gacatccaggagagcatcgaggagctgcgctactaccgcgaggccgtcttcgtgacgccg
cccggccccgactcgagcacggccaaggagatcgcggccaggcacgcgggctccgtcacc
ggcctgcagggcggtgccagcacccccgattccacaccgggcgcctga
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