Nocardioides daphniae: E2C04_05435
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Entry
E2C04_05435 CDS
T05939
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2C04_05435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndp03400
]
E2C04_05435
Enzymes [BR:
ndp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E2C04_05435
DNA repair and recombination proteins [BR:
ndp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E2C04_05435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QCC76798
UniProt:
A0A4P7UBZ3
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All DBs
Position
1094647..1095477
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AA seq
276 aa
AA seq
DB search
MPEGHTLRRLAGHLDEAFAGRPVRASSPQGRFEVEARQIDGAVLVGADSIGKQLFVEFSG
ERFVHVHLGLIGGWEVTTGVEEVPPPVGAVRLRLATATAYADLRGATRCDLVGPETVERV
RAQLGPDPLRPEDDVERAWAKVRVSSRTIGDLLMDQTVLAGVGNVYRAEVLFRHRIDPLR
QGRQVTRAQFVALWDDLVVLMNEGVATGRIDTVRPEHTPEAMGRPPRKDDHGGEVYVYRR
TAMPCLVCGTPVSSSTLGGRNLFWCSKCQRAPRRRD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggggcacaccctccgccgtctcgcgggccacctggacgaggccttcgccgga
cgcccggtgcgggcctcgagcccgcagggccgcttcgaggtggaggcgcggcagatcgac
ggcgcggtgctggtcggcgccgactcgatcggcaagcagctcttcgtcgagttcagcggc
gagcgcttcgtccacgtccacctgggcctgatcgggggctgggaggtcaccacgggcgtc
gaggaggtcccgccgccggtcggtgccgtacgcctgcgcctggcgacggcgacggcgtac
gcggacctgcgcggtgccacccggtgcgacctggtcggaccggaaaccgtggagcgggtg
cgggcccagctcgggcctgacccgctgcgccccgaggacgacgtggagcgggcctgggcg
aaggtgcgggtcagcagccgcaccatcggcgacctgctgatggaccagaccgtgctcgcc
ggcgtcggcaacgtctaccgggcggaggtgctcttccggcaccgcatcgaccccctgcgc
caggggcgacaggtcacccgggcccagttcgtcgccctgtgggacgacctcgtggtcctg
atgaacgagggggtggccaccggtcggatcgacacggtgcggcccgagcacacccccgag
gcgatgggacggccgccgcgcaaggacgaccacgggggagaggtgtacgtctaccgacgc
accgcgatgccgtgcctggtgtgcggcacgccggtgagcagcagcacgctgggtggtcgc
aacctcttctggtgcagcaaatgccaacgcgccccgcgtcggcgcgactag
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