Nostoc edaphicum: HUN01_24405
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Entry
HUN01_24405 CDS
T07001
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
ned
Nostoc edaphicum
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ned03000
]
HUN01_24405
Transcription factors [BR:
ned03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
HUN01_24405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_7
TetR_C_31
TetR_C_15
TetR_C_11
TetR_C_41
LacI
PrmC_N
HTH_22
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
QMS90567
UniProt:
A0A7D7LJB6
LinkDB
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Position
complement(5165795..5166409)
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AA seq
204 aa
AA seq
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MVRIKSDEVDRDNSVDKVEQILQGAMQEFLQNGYAGTSMDRVAVAAGVSKATVYSHFQDK
EGLFKVLLEQLASKKNNSIFGTEPIGKEPAAVLHHLGTKALDLMNSDQEHTAFMRVLIGE
SGRFPELAQICVRAMIKPVAETLTQYLAAPELNIPDPEATARILLGALVHFHITQDVMHG
RDIIPMESDRLIDALIHLITKRAD
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggtacgcattaaatctgacgaagttgatcgcgataattccgttgataaagtggagcaa
attctgcaaggggcaatgcaagagtttctccaaaatggttatgctggtacaagtatggat
cgagtagcagtagcagcaggtgtttctaaagcgacagtctacagccactttcaagataaa
gaaggactttttaaagtactgttagagcaactggcgagcaaaaagaataactctattttt
ggcacagaacctattggcaaagaaccagcagccgtactacatcacttaggtactaaagca
ttagatttgatgaatagcgaccaagaacatactgcatttatgcgagtattaataggggaa
tctggtcgttttcctgagttagctcaaatttgtgtccgagcgatgattaagccagtggcg
gaaactctcactcaatacttggccgctcctgagctaaatatacctgacccagaggcaaca
gcaagaattcttttaggagcgttagtgcattttcatattactcaggatgtgatgcatggg
agagatattataccaatggaaagcgatcgcttgattgatgccttgatacacttaatcact
aaacgcgccgattga
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