Neorhizobium sp. NCHU2750: NCHU2750_19000
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Entry
NCHU2750_19000 CDS
T05650
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nen
Neorhizobium sp. NCHU2750
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nen03400
]
NCHU2750_19000 (phrB)
Enzymes [BR:
nen01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NCHU2750_19000 (phrB)
DNA repair and recombination proteins [BR:
nen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NCHU2750_19000 (phrB)
Prokaryotic type
NCHU2750_19000 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AYD01287
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All DBs
Position
1956706..1958142
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AA seq
478 aa
AA seq
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MSDPSPAPAILWFRKDLRLDDNAALHAALDGGGPVIPVYVNEPDELNVGPLGGAQEWWLH
HSLHALKNALKSLGSDLVLLSGKAEDILADVAKRTGARTVYVNRAYERNDIDREIALALK
EKGIAIRAFHVQLLHDPRTIRTGSGNAFKVFTPFWNAMQKLHEPHEPVDAPSAIPAPDHF
PRSENLDGWDLLPKSPDWAKDFSNMWTPGEAGALQKLEELVDRELHDYKRGRDLPSVDAT
SNLSPHLAMGEISPARVWHAVRGMPKKASEDVSHFRRELAWRDFCHSLLIEFPALDRENW
DEKFDPFEWQYDAREFRAWTKGMTGYPIVDAGMRQLWRYGFMHNRVRMITASFLIKDLMI
DWRKGEQWFRDTLVDACPANNPANWQWVAGSGADASPFFRIFNPVLQGEKFDPDGDYVRE
HVPELARLEKKYIHKPFDAPAHVLEKAGIELGRTYPKPIIDHGFARDRALAAYKALKD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacccgtcacctgcccccgcgatcctctggtttcgcaaggacctgcgcctcgac
gacaatgcggccctgcatgcagcgctcgatggaggcggccctgtcattcccgtctatgta
aacgagcccgacgaactgaatgtcggcccgctcggcggcgctcaggaatggtggctgcat
cattcgcttcacgcattaaaaaacgccctcaagtctctgggcagtgaccttgttctcctg
tccggcaaggcggaagacattctggcagatgtcgcgaaaaggaccggcgcccgcaccgtc
tatgtcaaccgcgcctatgagcgcaacgacatcgaccgcgagattgccctggcgttgaag
gagaagggcatcgccatccgcgcctttcacgtccagctgctgcacgacccgaggacgatc
cgcaccggctccggcaacgccttcaaggtgttcacgcccttctggaacgccatgcagaag
ctccatgagccgcatgagccggtcgatgcgccctccgccataccggcacccgaccacttt
ccccgctcggaaaacctcgacggctgggatctcctgccgaagtcgccggactgggcaaag
gacttctcgaacatgtggacacccggcgaggccggcgcattgcagaaactcgaggagctc
gtcgaccgagaattgcacgactacaagcgcggccgcgacctgccctcggtggatgccaca
tcgaacctttccccccatctcgccatgggcgagatttcgccggcgcgcgtctggcatgcg
gtgcgcggaatgccgaaaaaggcgtccgaagacgtctcgcatttccgccgcgaactcgcc
tggcgcgatttctgccacagcctgctgatcgaattcccggcactcgaccgcgagaactgg
gacgagaaattcgaccccttcgaatggcaatacgatgccagggaattccgtgcctggacg
aaggggatgaccggatatccgatcgttgatgccggcatgcggcaattgtggagatacggc
ttcatgcacaatcgcgtccgcatgatcaccgcctccttcctgatcaaggacctgatgatc
gactggcgaaagggcgaacaatggttccgcgatacgctggtcgatgcctgcccggccaac
aatccggccaactggcaatgggtggccggctccggcgccgatgcctcgcccttcttccgc
atcttcaatccggtgctgcagggcgagaaattcgatccggacggagattacgtccgcgaa
catgtgccggaactggcaaggctggagaagaaatacatccacaagcccttcgatgccccc
gcccatgtactggaaaaggccgggatcgaacttgggcggacctacccgaagccgatcatc
gatcacggctttgcccgcgaccgggcgttagccgcctacaaggcgctgaaggactga
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