Neorhizobium sp. SOG26: CYG48_11090
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Entry
CYG48_11090 CDS
T05626
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
neo
Neorhizobium sp. SOG26
Pathway
neo03420
Nucleotide excision repair
neo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
neo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CYG48_11090
03430 Mismatch repair
CYG48_11090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
neo03400
]
CYG48_11090
Enzymes [BR:
neo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CYG48_11090
DNA repair and recombination proteins [BR:
neo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CYG48_11090
MMR (mismatch excision repair)
Other MMR factors
CYG48_11090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AXV16190
UniProt:
A0A346YNZ3
LinkDB
All DBs
Position
2219293..2221362
Genome browser
AA seq
689 aa
AA seq
DB search
MSIAYLEKLNDAQRRAVEHGSDVPNGGAAGPLLVIAGAGSGKTNTLAHRVAHLIVSGADP
RRILLMTFSRRAASEMARRVERICKQVLGANAGVMTDALAWAGTFHGIGARILRLYAQQI
GLDPDFTIHDREDSADLMNLVRHELGFSKMESRFPTKGTCLAIYSRAVNSETPLDEVLKG
QFPWCLNWEKQLRELFGAYVEAKQAQNVLDYDDLLLYWAQMMAEPAIAEDVGTRFDHVLV
DEYQDTNRLQSSILMAMKPGGRGLTVVGDDAQSIYSFRAATIRNILDFPASFDPPAQIVT
LDRNYRSTTTILAAANGVIDLARERFTKNLWTDREAEERPRLVTVKDEAEQANYIVEKVL
ENREAGMTLKNQAVLFRASHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFA
QNPRDRVSGFRLMQLIPGVGPQTAGKILDAISADPEPLAALEEIPAPPRSGADWPAFVEM
LSAVRRKEGWPSEIGLARQWYEPHLERIHEDAETRKADLLQLEQIAAGYASRERFLTELT
LDPPDATSAEAGVPLLDEDYLILSTIHSAKGQEWRSVFLLNCVDGCIPSDLGTGSTAELE
EERRLLYVAMTRAKDHLHLITPQRFFVHGQQSQGDRHVYASRSRFIPATLLQFFETTAWP
VVAPMSDAERQHRQQVRIDVTARMRGMWR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgcctatctggaaaagctcaatgatgcacagcgccgggccgtggagcacggt
tcagacgtgccaaatggcggtgcggccggtccgctgctggtgattgccggtgccggctcc
ggcaagacgaacacgctggcgcaccgggtggcacacctcatcgtctctggcgctgatccg
cgccgcatcctgctgatgaccttttcccgtcgcgcggcgtccgaaatggcgcgccgtgtc
gagcgcatctgcaagcaggtgctgggcgccaatgccggcgtgatgaccgatgcgcttgcc
tgggccggcaccttccacggcatcggggcacgtatcctgcggctttacgcccagcagatc
ggccttgatcccgacttcaccatccacgaccgggaagattccgccgatctgatgaacctc
gtgcgccacgagctcggtttctcgaagatggaaagccggtttccgaccaagggcacctgc
cttgccatctattcccgcgccgtcaattccgagacgccgctggacgaggtgctgaaaggg
cagtttccctggtgcctcaactgggaaaagcagctgcgggaactgtttggcgcttatgtc
gaagccaagcaggcccagaacgtcctcgattacgacgacctgctgctctactgggcgcag
atgatggccgaaccggccattgctgaggatgtcggcactcgtttcgaccatgtcctggtc
gatgaataccaggacacgaaccgcctgcagtcgtccatcctcatggcgatgaagccgggc
ggccgcgggctcaccgtcgtcggcgatgatgcccagtcgatctattcctttcgcgccgcg
acgatccgcaacatcctcgatttcccggcaagtttcgatccgccggcgcagatcgtcacg
ctcgatcgcaactaccgctccaccacgaccatcctggcggccgccaacggtgtcatcgat
ctggcccgcgagcgcttcaccaaaaacctctggaccgacagggaagccgaggagcgaccg
cgcctcgttaccgtgaaggatgaggcggaacaggccaactacatcgttgaaaaggtgctg
gaaaaccgcgaggcgggcatgacgctgaagaaccaggcggtcctgtttcgcgcctcccac
cattccggcccgctggaagtggagctcacgcgccgcaatatcccgttcgtcaagttcggc
ggcctgaagttcctcgatagcgcgcatgtgaaggacatgctggcggcgctgagatttgcg
cagaacccgcgcgatcgcgtttcaggtttccggctgatgcagctcatcccgggcgtcggt
ccacagacggcgggcaagatcctcgatgccatctccgccgatccggagccgctcgcagcg
ctcgaagaaatcccggcgccgccgcgctccggcgccgattggccggccttcgtcgagatg
cttagcgcggtgcgccgaaaggaaggctggccgtccgagatcggccttgcccgccagtgg
tacgagccgcacctggaacgcatccacgaggatgccgaaacccgcaaggccgacctgttg
cagctcgagcagatcgcagccggttatgcgtcgcgagaacgtttcctcaccgagctgacg
ctcgatccgccggacgcgacgagcgcggaagccggggtgccactgctggacgaggattac
ctgatcctctccaccatccattccgccaagggccaggaatggcggtcggtcttcctgctc
aactgcgtcgatggctgcattccatccgacctcggcaccggctccacggccgagctggag
gaagaacgccgcctgctttatgtcgcgatgacgcgggcgaaggaccacctgcatctcatc
acgccgcagcggtttttcgtgcacggtcagcagtcacagggcgaccggcatgtttatgcc
tcgcgctcccgcttcatcccggccaccttgctgcagttttttgaaaccaccgcatggccg
gtcgtggcgcccatgtcggatgccgaacgccagcatcgccagcaggtgcgcatcgatgta
acggcgaggatgcgcggcatgtggcgctga
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