Nitrosomonas eutropha: Neut_2303
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Entry
Neut_2303 CDS
T00393
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
net
Nitrosomonas eutropha
Pathway
net02020
Two-component system
net02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
net00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Neut_2303
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Neut_2303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
net03021
]
Neut_2303
Transcription machinery [BR:
net03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Neut_2303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_IclR
Sigma70_r4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABI60520
UniProt:
Q0ADR2
LinkDB
All DBs
Position
2428067..2429530
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AA seq
487 aa
AA seq
DB search
MKPTLQLKLSTGLTLTPQLKQSIQLLQLSALELNQEISRIVQENPLLELDEDIDQEKLET
EGQDSSLVSSDLSTTAEANESHDIRENTEISNDWLDDSLYSDQGAFLDTRRQDDEEYDQD
YSRLVSKPASLREHLLMQISLRQRCERKKKITALLVDSLDDNGYFTQDLEELAKLLPVEL
EIDITDLKSALAYIQQLDPPGVGARNLRECLSIQLSALPDATPLRTEALKLVNEHLESVA
AKNFPLLRKVLGCDETCLQSVYQLITQLNPKPGDDFNATTARYVIPDVIVTKSAKGWVAQ
LNSDSVPRVRVNHLYADILKQNRNEAIRPLMEQLKEARWLIRNIDQRMVTILRASQAIID
CQQAFLEHGETAVRPLVMREIAEVLGLHESTISRITTQKYMRTPHGIFELKYFFGSHIPA
ETGEAHSAIAIRGLIKQLIQNEDRKKPLNDSQVSQILAQQGIVVARRTVAKYREFMHIPP
TNLRKIP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgactctgcaactcaagctttctaccggccttacactgacaccgcaactgaaa
caatcaattcagctgcttcaactatctgcacttgaactcaaccaggaaatctcacgtatt
gtccaagaaaaccctttgcttgagctggatgaagatatcgatcaagaaaaacttgaaact
gaaggacaagattcttcgttagtatcatcagatttatctactacagcagaagctaatgaa
tcccatgatattagagaaaacactgaaatatcgaacgactggctagatgactcattgtat
tcagatcagggggcttttttagacacacgtagacaagatgatgaggagtatgatcaggac
tattctcgcctggttagcaaacccgccagcttgcgtgaacacctgctcatgcaaatcagc
ttgaggcaacgttgcgaacgaaaaaagaaaattaccgcgctgctggtggatagtctggac
gataatggttattttactcaggatctggaagagcttgccaagttacttccggttgagctg
gaaatcgacatcacggacctgaagtcagcccttgcttatattcagcaactggatccgccc
ggcgtaggagcacgcaatctgcgggagtgtctgtctatacagctttcagcattgccggat
gcaacgccactacgaacggaagcactcaaactggtcaatgagcacctggaaagtgtcgct
gccaaaaatttcccattgctcaggaaagttcttggctgtgatgaaacctgtttacagtca
gtttaccagttgatcactcaactcaatcccaagcctggcgatgatttcaacgcaacaaca
gcacgttatgtcattcctgatgtgattgtgaccaaatcggctaaaggctgggtggcacag
ctcaattccgattcagttccgcgtgtgcgcgttaaccatttatatgccgacattctgaag
cagaatcgtaatgaagcaatccgaccactgatggagcaactgaaagaggcccgctggctg
atcagaaatatcgaccagcgcatggttaccatactccgggccagtcaggcgattattgat
tgccagcaagcattcctggagcatggcgaaacagctgtgcgcccccttgttatgcgtgaa
attgccgaagttcttggattacatgagtcaaccatttctcgtatcacaacccagaagtat
atgcggacaccgcacggtatctttgagctcaaatatttctttggaagccatattcccgct
gaaacgggtgaagcacattcagccatagctattcgtggacttattaagcaattgatccag
aatgaggatcgaaaaaagccacttaatgatagtcaagtttcacaaatactcgcgcagcag
ggtattgttgttgctcgccgtactgttgcaaaatatcgggagttcatgcatattcccccg
actaatttacgtaaaataccctag
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