Nitrosomonas europaea: NE0505
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Entry
NE0505 CDS
T00130
Symbol
rluD
Name
(GenBank) rluD; ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
neu
Nitrosomonas europaea
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
neu03009
]
NE0505 (rluD)
Enzymes [BR:
neu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
NE0505 (rluD)
Ribosome biogenesis [BR:
neu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NE0505 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAD84416
UniProt:
Q82WZ5
LinkDB
All DBs
Position
complement(543547..544581)
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AA seq
344 aa
AA seq
DB search
MMNRLINEQDGRNYSAKPDSSAAGSQENENTIELTVPDNLAGLRLDQALAQLLPQWSRSR
LQGWIEQKCVSVDSAAATCKQKVWGGESIRVIAGQTENDQSHQAEAIPLKILFEDDHLII
IDKPAGLVVHPGNGNWHGTLLNALLNHAPQLSQVPRAGIVHRLDKDTTGLLVVAKTIEAQ
FDLARQLQQRTVKRHYLALVLGKLEKDGVVDAPIGRHPIHRTRMAVVQNGKPARTHYRVL
EKFTASTLLHCSLETGRTHQIRVHLLSIGHPLAGDPVYGRTSPDPSTADAVVRLPRQALH
AWQLELTHPHSGQILLWESPLPDDMAALLQAIRNLPHSSVSRPL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccgtctcattaacgagcaagatgggcgcaattatagcgcaaagcccgactca
tccgcagccggcagtcaggagaatgaaaacaccatcgaactgactgtacccgataatctc
gcagggctgcgcctggatcaggccttggcgcaactgcttccccagtggtcacgcagccgg
ttacaaggatggatcgaacaaaaatgtgtcagcgtggatagcgcggcagcaacctgcaaa
cagaaggtatgggggggagaatccattcgtgtaattgccggccagactgaaaacgatcaa
agccatcaggcggaggccattccactcaaaatcctgttcgaagatgaccacctgattatc
atcgataaacctgccggcctggtcgtccatccgggaaacggtaactggcatggaaccctg
ctgaacgcactgctcaatcatgccccgcagctcagccaggtaccacgcgccggtatcgtt
caccggctggacaaggataccaccggcctgctggtcgtcgctaaaacgatcgaggcacag
ttcgatctggccagacaattgcagcaacgcactgtcaaacgccattatctcgcactcgtg
ctaggtaaacttgaaaaagatggcgtagtagatgcgccgattggcagacaccccatccac
cgcacccgcatggcagtcgttcagaatggcaaaccggcacgcacgcattaccgggtgctg
gaaaaatttactgccagcacattgctgcactgcagcctggaaaccgggcgcacacaccag
attcgcgttcatctgctgtccatcggccatccacttgcaggagatccggtatatggcaga
acatcccctgatccatcgacagcagatgcagttgtacgcctgcccagacaagcgctgcat
gcctggcagctcgaactgacacaccctcacagcggacaaattctactttgggaatcccca
ctgccggacgatatggccgctttattgcaggcaatacgcaacctgcctcattcctctgtt
tccaggccactataa
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