KEGG   Aspergillus fischeri: NFIA_066120Help
Entry
NFIA_066120       CDS       T01070                                 

Definition
(RefSeq) DNA ligase I, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nfi  Aspergillus fischeri
Pathway
nfi03030  DNA replication
nfi03410  Base excision repair
nfi03420  Nucleotide excision repair
nfi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nfi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NFIA_066120
   03410 Base excision repair
    NFIA_066120
   03420 Nucleotide excision repair
    NFIA_066120
   03430 Mismatch repair
    NFIA_066120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nfi03032]
    NFIA_066120
   03400 DNA repair and recombination proteins [BR:nfi03400]
    NFIA_066120
Enzymes [BR:nfi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NFIA_066120
    6.5.1.6  DNA ligase (ATP or NAD+)
     NFIA_066120
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     NFIA_066120
DNA replication proteins [BR:nfi03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    NFIA_066120
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     NFIA_066120
DNA repair and recombination proteins [BR:nfi03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NFIA_066120
   NER (nucleotide excision repair)
    Other NER factors
     NFIA_066120
   MMR (mismatch exicision repair)
    Other MMR factors
     NFIA_066120
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Spore_SspJ
Motif
Other DBs
NCBI-GeneID: 4589865
NCBI-ProteinID: XP_001263345
UniProt: A1D6V4
LinkDB All DBs
AA seq 833 aa AA seqDB search
MPSPAKKRKREAPESTPQRVRSIASFFQGQANKKAEKTEQIVDSANENAAEETLSDEALA
RKLQAEFDKEGAAPAVEPEVPNHKPIQEPYAPTETDSGPPSKVPKTNTISLQSSVGTEDT
ISLSIPFDQSPLTFDSTKCAAELQVHWATEGGNASYALLTRAFVLANATTSRIRIIDTLV
NFLRVLIEGDPSSVLPAVWLATSSISPPYDELELGLGGSAISKALKKVYGLNPYGLKSLY
DKYGDAGDVAFEAKKRQSFTLMKPKPLTIKGVYQSLRKIAMSKGTGSQESKQRIVEKLLQ
DTRGAEESRYIVRTLVQNLRIGAVKTTMLIALARAFLYSKPEGAEFTIRSRQDLARLKKE
ELAEIYNRAEEIVKASYARHPNYNDLVTCLLEIGVTEELLLRCGLQLHVPLRPMLGSITR
DLSEMLTKLQGRDFSCEYKYDGQRAQVHCDEKGKVSIFSRHLENMTEKYPDLVSLVTQIR
GEGVSSFILEGEVVAVDNKTGELQTFQVLTNRAKKNVEIGAININVCLFAFDLMYLNGEP
LLDRPFRERRELLRSLFVEIPNRFTWVKSLDATSADSETVLEFFKSALENKCEGIMVKVL
DNVPKANLEQNKEAFTSNGMDVTSGEPLEKAGKGGRRKALLSTYEPDKRLESWLKVKKDY
STSSETLDLIPIAGWHGQGRKAKWWSPILMAVRNPETGSLEAVTKCMSGFTDKFYQANKD
KYAEGTPNVISRPAYVEYYGEPDVWFEPQEVWEMAFADITLSPTYTAAIGLVSDERGLSL
RFPRFLRVREDKSIDEATTSDYLALLWRKQAERKKEEEQHPDRDTEQLGWQDE
NT seq 2502 nt NT seq  +upstreamnt  +downstreamnt
atgcccagtccggccaaaaagcgcaaaagagaggctccagaatcaaccccacagcgtgtc
cggagcatagcgtcattcttccagggccaagccaacaagaaagccgagaagacggaacag
attgttgactctgctaatgaaaatgcagcagaagaaacactatctgacgaagctcttgct
cgcaagcttcaagcggagttcgataaagagggtgctgcaccggccgtggagcctgaggtt
ccgaatcataagcctatccaggaaccttacgccccgacagagacagatagtggaccgcct
agtaaagtcccgaaaacaaatacaatctcattgcagtcttccgttgggacagaggataca
ataagtctttccatcccttttgaccagagtccgttgacgttcgactcgaccaaatgcgcg
gcagagttgcaggtccactgggctacggagggtggaaacgcctcatatgccctgctgact
agagcatttgtgttggcaaatgcaacgactagtcgaatcaggattattgataccctggtc
aatttccttcgagttctgattgaaggcgatccttccagtgttttaccagcagtctggcta
gcgaccagctcgatttcgccgccatacgacgaattggaacttggcttgggaggctccgcg
atatcaaaagcactgaagaaggtctacggactcaatccttatgggctcaaaagtctctac
gacaagtatggagatgctggcgacgtggctttcgaggcaaagaaaagacagagcttcacc
ttaatgaagcccaagcctctgacgatcaaaggtgtctatcaatccctgaggaagattgcg
atgagcaaagggactggtagtcaggagtccaagcagagaattgtggagaaactcctacaa
gacactcgaggtgcggaagagagccggtatattgtacgcacgctggtgcaaaatttaaga
atcggggctgtcaaaacaacgatgcttatcgcgctggctcgagcctttctatactcaaag
cctgaaggcgcagagtttacgatccgttcacgacaagatctggcgcgactaaagaaggag
gaactggccgaaatttacaaccgagcggaagaaatagtgaaggcatcatatgccaggcat
ccaaactacaacgacttagttacatgcttacttgaaattggagttaccgaagaacttctt
ctgcggtgcggcctgcagcttcatgtgcctctgagacccatgttgggcagtatcacgagg
gatctctctgaaatgctaacaaagctgcaaggacgggattttagttgcgagtacaaatat
gatgggcagcgtgcacaggtgcactgcgacgagaaggggaaagtatcgatattttctcgc
catttggaaaatatgacggagaagtacccagatcttgtgtccttggtcacgcaaatcaga
ggagagggcgtctctagcttcatattggaaggagaggttgtcgcagtagacaacaaaacc
ggtgaactccagacgttccaagtcctgacaaatcgagcaaagaagaacgtggagatagga
gcaatcaacatcaatgtttgcctcttcgcgttcgacttgatgtatctaaacggcgagcca
ctattggatcggcctttccgcgaacgcagagagttgttgcgcagcctattcgtggagatt
ccaaacagattcacttgggtcaaaagccttgacgccacgtccgcagactcggagacggtc
ttggagttcttcaaaagcgccctcgagaacaaatgcgaagggatcatggtcaaggtgctt
gacaatgtacccaaggcgaaccttgaacagaataaggaggccttcacgagcaacggcatg
gacgtgacgagcggggaaccgctcgaaaaggcgggcaaaggcggcagacgaaaagcactc
ttatcaacatatgaaccagacaagcggctcgagtcgtggctcaaagtcaagaaggattac
agtacctcgtccgagaccctagatctgatccccattgccggctggcacggacaaggccga
aaagccaaatggtggtctcccattctgatggccgtccgcaaccctgaaacgggcagcctc
gaagcagtcactaaatgcatgtccggcttcacggataagttctaccaggcgaacaaggac
aagtacgccgagggaacgcccaacgtcatctcacggccggcctatgtcgagtactacggc
gaacctgacgtctggttcgaaccgcaggaggtctgggagatggcgttcgccgacatcact
ttgagtccgacatacacggccgctatcggcttagtgagcgacgagcggggactgagcctc
cggtttccacgatttctcagagtaagagaagacaaatcaatagacgaagccaccacatcg
gactatctggctctcctgtggcggaagcaggccgaacggaagaaagaagaggagcagcac
cccgacagggacacagagcaactaggttggcaggatgagtag

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