Aspergillus fischeri: NFIA_091240
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Entry
NFIA_091240 CDS
T01070
Name
(RefSeq) 3' exoribonuclease family protein
KO
K12587
exosome complex component MTR3
Organism
nfi
Aspergillus fischeri
Pathway
nfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFIA_091240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfi03019
]
NFIA_091240
Messenger RNA biogenesis [BR:
nfi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NFIA_091240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
4587620
NCBI-ProteinID:
XP_001261062
UniProt:
A1DIF8
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MTDRRRINGPPSGTRPVVFASSLKSTTDTASGRPQRQRQPNELRKIFLKTGLIPSASGSS
YLEFEPSASLAAARSSPQSLIPPSSALKLACTVHGPKPLPRSATFSPNLVLTTHVKYAPF
AARRRKGHIRDTSERDLGVHLETALRGVIVAERWPKSGLDITITILEAEDDRWWGDAPDS
HDAPWGMMNVLAGCITAASAAIADARIDCLDLVAGGVAALVSDELPEGERSAPKLMLDTD
PAEHRSILSACVVAYMPSRDEITEIWLKGDSSKVLLAPDDKRSGHDALIDGAVDAARGAH
TVLAEAVRESAERFAGLATV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgacgaagaatcaatgggccgcccagtggcacaaggcctgtggtctttgca
tcgtcgctcaaatctacgactgatactgcatctggcaggccacaacggcaaaggcagcca
aatgaactgcgcaaaatattcctcaagactggcttgattccgtccgcatctggctcctca
tacctcgaattcgaaccctcagcctccctcgccgctgcacgctcttctcctcaatctctc
atccctccttcttcagcgctgaagctcgcatgcactgttcacggaccgaaaccgcttccc
cgctctgctacattctcgcccaaccttgtcctcaccactcatgtcaaatatgcgccgttc
gctgcccgcaggaggaaagggcacatccgagacactagcgaacgggacctgggtgtacat
ttagagaccgcgctgcggggtgttattgttgctgaacggtggccgaagagtggattggat
atcacgattacgatcttagaggcagaagatgatcggtggtggggggatgcgccagactct
catgatgctccgtgggggatgatgaatgttctggctggatgcatcacggctgcctctgcg
gctattgcggatgcgcggatcgactgtttggatctcgtggctggcggcgtagctgctctt
gtttctgatgagttgccggagggagagaggtcagcgccgaagcttatgctggatactgac
cctgctgaacatcggtctatcctgtcagcatgtgtcgtcgcatatatgccttctcgggat
gagattacagaaatatggcttaagggggatagttcgaaggttctattagcgcccgatgac
aagcgctcggggcatgatgctttaatagatggggcggtggacgctgctcggggagcgcat
acggttctggcagaggcagtgagggaatctgctgaacggttcgccggccttgctacagtt
tga
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