Nostoc flagelliforme: COO91_03094
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Entry
COO91_03094 CDS
T05266
Name
(GenBank) topA, DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nfl
Nostoc flagelliforme
Brite
KEGG Orthology (KO) [BR:
nfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfl03032
]
COO91_03094
03400 DNA repair and recombination proteins [BR:
nfl03400
]
COO91_03094
Enzymes [BR:
nfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
COO91_03094
DNA replication proteins [BR:
nfl03032
]
Prokaryotic type
DNA Topoisomerases
COO91_03094
DNA repair and recombination proteins [BR:
nfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
COO91_03094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
DUF6429
Motif
Other DBs
NCBI-ProteinID:
AUB37158
UniProt:
A0A2K8SP28
LinkDB
All DBs
Position
complement(2902131..2904692)
Genome browser
AA seq
853 aa
AA seq
DB search
MGHVRDLPQSASEIPAAVKGESWAQLGVNVDADFEPIYVVPKDKKKIVTQLKDALKDVDE
LILATDEDREGESISWHLYQLLKPKVPTKRMVFHEITEEAIKKALKNCRNIDEQLVRAQE
TRRILDRLVGYTLSPLLWKKIAWGLSAGRVQSVAVRLLVTRERQRRAFHEGTYWDLKASF
SKEKPPFAAQLVTLAGTKIANGSDFDAATGQITAGRNVLLLNEDQAVALKERLTGKTWSV
TEMEERPVTRKPSPPFTTSTLQQESNRKLRLSARDTMRVAQNLYEQGYITYMRTDSVHLS
DQAIAAARSSVEKLYGQQYLSPQPRQYTTKSKGAQEAHEAIRPAGSTFRTPQETGLGGRE
LAVYDLIWKRTVACQMADSRQTQITVQLQVEDAGFRSSGKRIEFPGYLRAYVEGSDDPEA
ALEDQEVILPNLKVGDHPNCTELEAVGHETQPPARYTEASLVKTLESEGIGRPSTYASII
GTIIDKGYAHLVSNALIPTFTAFAVTDLLEKHFPDIVDPSFTSKMEQTLDDISTGEAKWL
PYLQQFYLGEKGLETLVKEQESQIDATKARTVELENLDAKVRIGKYGPYIEVENGEGVIT
ASIPKELTPADLDPKQVEVLLRQKITGPDQVGRHPETGEPIYVKIGAYGPYVQLGDKTDE
NPKPKQASLLKGVTPETVTLEMAVGLLALPRTLGVHPGTGGKIQASLGRFGPYVVHDQGK
EGKDYRSLKAADNVLTISLERALELLSEPKKGRSSTNSKSKAALRELGTHPDDGETINIY
DGPYGPYIKHGKTNVSIPEGQTVENITLAEALNLLSAKASTAKSTRKTTKSTTSKSKSTA
KSTTSTKKKGAEG
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatgtgcgtgaccttccccagtcggctagtgaaattcctgctgccgtcaaaggg
gaatcatgggcgcagctaggggtaaatgtggacgccgactttgaaccgatatatgttgtc
ccgaaagacaaaaagaaaattgtcacccagcttaaagatgccctcaaggatgtagatgaa
ctgattctggcaacggacgaagaccgggaaggtgaaagtattagttggcatttataccaa
ttgctgaagccgaaagttcccactaaacggatggtgtttcacgaaataaccgaagaggcg
atcaaaaaagctctgaaaaactgccgcaatattgatgagcagttggttcgcgctcaagaa
acgcggcggattttagatcggctcgtaggctataccctgtctccactgttatggaaaaaa
atcgcctggggattatctgctgggcgagtgcaatctgtagctgtccgacttttagtcact
agggaacgccaacgccgcgctttccatgagggtacatactgggatctgaaagccagtttc
tcaaaagaaaaacccccctttgctgcccagttggtgacattagcaggaaccaaaatcgct
aacggcagtgattttgacgcagcgaccggacaaattaccgcaggtcgcaatgtcttgttg
ctcaacgaagaccaagctgtagccctcaaggaacgcttaacagggaaaacctggagtgtt
accgagatggaggaacgcccagtgacgcgcaaaccgtcgccaccgtttaccacttcaacg
ctgcaacaagaatctaaccggaaattgcgcctctcagcccgtgacacaatgcgcgttgcc
cagaatttgtacgagcaggggtatattacctatatgcggacagattcggtgcatttgtca
gatcaagcgatcgcagctgctcgaagttctgtagaaaaactttacggtcaacaatacctc
agtcctcaaccccggcaatacaccaccaaatctaaaggcgcacaagaggcgcacgaagca
attcgtccagccggtagcaccttccgcacccctcaagaaactggtttgggcggtcgagaa
cttgccgtttacgatttgatttggaagcggactgttgcctgtcaaatggctgattcccgc
caaactcaaattaccgtgcaattgcaagtcgaggatgctggattccgttcttctggcaaa
cggattgaatttccaggatacttacgtgcctacgtcgaaggttcagatgacccagaagca
gcactggaagaccaggaagtgattttgccgaatctgaaagtgggagatcatccgaattgc
acagaactggaagcagttgggcacgaaacccaaccgccagctagatacaccgaagcttct
ttggtgaaaaccttagaaagtgaaggtatcggtcgtcccagtacttacgccagtatcatt
ggcacaatcatcgacaaaggttatgcccatttggtgagtaacgctcttattcccaccttc
accgctttcgccgtcaccgatttactggaaaaacatttcccagacattgttgatcctagt
tttacctcgaagatggagcaaacccttgatgacatttctacaggtgaagcaaaatggcta
ccctacttgcagcaattctatctgggagagaaagggctagaaaccctggtaaaagaacag
gaaagtcaaattgatgctaccaaagctaggactgtagaactggagaatctagatgccaaa
gtccgcattgggaaatatggcccctacattgaagttgaaaatggtgaaggggttatcacc
gcttcaattcccaaagaattgacaccagccgacctcgaccccaaacaggtagaagtattg
ctgcgacaaaaaatcacaggacctgaccaggtaggccggcatcccgaaactggcgaaccg
atttatgtgaaaattggtgcttatgggccttatgtccaattgggtgataaaaccgacgaa
aaccccaaacctaaacaagcctccctactcaaaggtgtcaccccagaaaccgttaccctg
gaaatggctgttggtctgttggcactaccccggacattgggagttcatccaggtactggc
ggcaaaatccaagcaagtttggggcgctttggtccttatgtggttcatgaccagggtaag
gaggggaaagactaccgttctctaaaagcggctgataatgtattgacaattagcttagaa
cgtgcattagaattattgtcggaacccaaaaaaggacgtagttctacaaacagcaagtcc
aaggcagctttacgcgaattgggtacacatccagatgatggagaaacaattaacatctac
gatggcccttatggcccttacatcaagcatggcaaaactaatgtgagtatcccagaaggt
caaacggtagaaaatataactctggctgaggcgctgaacttgttgtcggctaaagcatca
acagcgaaatcgactcgcaaaacgactaaatcaacgacttctaaatctaagtcaactgct
aagtcaacaacctctacgaaaaaaaagggcgcagaaggttaa
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