Candidatus Nitrosocosmicus franklandus: NFRAN_0029
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Entry
NFRAN_0029 CDS
T05935
Symbol
metH
Name
(GenBank) Methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
nfn
Candidatus Nitrosocosmicus franklandus
Pathway
nfn00270
Cysteine and methionine metabolism
nfn00450
Selenocompound metabolism
nfn00670
One carbon pool by folate
nfn01100
Metabolic pathways
nfn01110
Biosynthesis of secondary metabolites
nfn01230
Biosynthesis of amino acids
nfn04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NFRAN_0029 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NFRAN_0029 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NFRAN_0029 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
NFRAN_0029 (metH)
Enzymes [BR:
nfn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
NFRAN_0029 (metH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pterin_bind
Met_synt_B12
B12-binding
B12-binding_2
CdhD
START_2
Ribosomal_L4
Motif
Other DBs
NCBI-ProteinID:
VFJ12350
UniProt:
A0A484I8N1
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Position
NFRAN:complement(31152..33746)
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AA seq
864 aa
AA seq
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MKIKYNDSPKVSSALNSVDLFQNPRPLIIGERLNSQGSKKAKQMVLNDDFDGLIEIARRQ
VEDGAHCIDVCVATTERSDEKEFMEKLVKRLSLEIEAPLVIDSTDSKVVKAALRQIPGVP
IINSINLEGDGSRFTDITPLMKKYGAPAISMCIGPDGMAKTSTEKLAVASLIYNKSMEIE
LKPWQLIFDVLTFTLATGEAEYVNSASETLKGIKLVKEKYPKVLTTLGLSNVSFGLPPLA
RKFLNSVFLYHAIQNGLDTVIINPKDIIPYPQISRSDRAKCEDLIFNNSNNALAELISHF
SSDNTSFQSQGGQSSKQNSVLELDMNWDAGKRCYFRIVNRLKDGIENDVALAISDRNQSD
SQMKIVETQMDENGIKKIEIKGDKEMLHKAAVETLNEVLLPAMKEVGDKFGAGELILPFV
LKSAECMKAAVAELEKYLIKQEGISKGKLVLCTVYGDVHDIGKNLVKTIFINNGYEVHDL
GKQVPIPMIINKIKEVNADAVGLSALLVSTSKQMQLFAEFLRENRIEIPVLCGGAAINSD
YINRIAKGDGTIYEPGIFYCKTAFEGLKVMNKLMSKERDQFMSDWIQKITKWEERKYDTS
ASKANSEDFVSNVRPVKNKPVPPRLNYVYRFKNTDLSLPDIWNYLNKKSLFVLSWGLRGK
SAKDLRNQYENLLTEWKNKVIEENLFEPQAVYSYFKCRRVGKNNLLIKYIDEKQNESELI
FEFPRSSNEQHLCLADYFDSEEDDIVAFQSVTMGNRVAEIIEEWNKNGRYTDAYYLHGLA
VESTEALADWINNRIKEDLSLKEGGLRYSWGYPSCPDITQHFLVWKLLNPSINGMTLTES
GQIVPEFSTAAIVVHNPVAQYFTL
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaagataaaatataacgacagtccaaaggtttcgtcggccttaaactctgtagatcta
tttcagaatccacgacccctgataataggtgagaggctaaactctcaggggtcaaaaaag
gccaaacagatggtattaaacgatgattttgatggtctgattgaaatagcaagacgtcag
gtagaggatggagcacattgcatagatgtatgcgttgctacaacggagcgttctgatgaa
aaagagtttatggaaaaactcgtaaagaggcttagtctagagatagaagcccctttagtt
atcgactcgacagattctaaagtcgtaaaggctgcacttagacaaatacccggtgtgcct
attattaattccatcaatctggagggagatggaagtagatttactgacatcactccttta
atgaaaaaatatggtgcgcctgctatatccatgtgtattggtccagatggaatggccaaa
accagtaccgaaaaattagcagtcgcaagtttgatttacaacaagtcaatggaaatcgaa
cttaaaccctggcagttaatttttgatgtacttacatttactctggcgactggcgaagca
gaatatgttaactctgcatcggaaactttaaaggggataaaactggtcaaagaaaaatat
cccaaagtcctgaccactcttggattaagtaacgttagttttgggcttcctcctctggca
agaaaattccttaattcagtattcttgtaccatgcaattcaaaatggacttgatactgta
attataaatccaaaagatattatcccttaccctcaaattagtagatcagacagagctaaa
tgcgaagatctgatctttaataacagtaacaatgctctggcagaattaatttcacacttt
agctcagacaatacctcatttcagtcgcagggcggtcaaagttcaaagcaaaatagtgta
ttggaactcgacatgaactgggatgcaggaaaaagatgctactttaggattgtaaataga
ctaaaggatggaatagaaaacgatgtggcattagcaatttcagacaggaatcaatcagat
tcgcaaatgaaaatcgtcgaaacccaaatggacgaaaatgggatcaaaaaaatcgaaatt
aaaggagataaagaaatgttacacaaggcagcagtcgagactttaaatgaagtactctta
cctgctatgaaagaggtaggggataaattcggagccggtgaactgatactcccatttgta
ttaaaatcggcagaatgtatgaaggccgctgtcgcagagctagagaaataccttatcaaa
caagagggaattagtaaaggaaaattagtattgtgtactgtttatggagatgtacatgat
attgggaaaaatttggttaaaacgattttcataaacaatggatatgaagtacatgacttg
ggcaagcaggttccgataccaatgattattaacaaaataaaagaggtaaatgctgatgct
gtgggattgtctgctctgcttgtatctacgtcaaaacagatgcaattattcgccgagttt
ttgcgtgaaaatagaattgaaattccggttttatgtggaggagcggcgataaacagcgat
tacattaatagaatagcaaaaggagatggaacaatttatgaaccaggaattttttattgc
aagactgcctttgagggtctaaaagtgatgaataaactgatgagtaaagaaagagatcaa
tttatgagtgattggattcaaaaaattaccaaatgggaggaaagaaaatatgatacttca
gcatcaaaagcaaactcggaggattttgtaagcaatgttagaccggtcaaaaataaaccc
gttcccccaagactgaattatgtgtacagattcaaaaatactgatctctcattgcctgat
atttggaattacctgaataaaaaatctctttttgtactttcttggggattgagaggaaaa
agcgcaaaggatctaaggaaccaatatgaaaatcttctcacagaatggaaaaataaagtc
atagaagaaaacctatttgaacctcaagcagtttattcatactttaagtgcagacgagta
ggcaagaacaatctcttgataaaatacatagacgagaaacaaaacgaatctgagttgatt
tttgagttccctagatcttcaaacgaacagcacctgtgtttagcagattattttgattca
gaagaggacgatatcgttgcttttcagtctgtaacaatgggaaatagagtagctgaaata
atagaggaatggaacaagaatggacgatacacagatgcgtattatttacatggattagca
gtagaatcaacagaagctctggcagattggattaacaataggataaaagaagatttgtcc
ttaaaggaaggaggtctaagatatagctggggatatccaagttgtcctgatatcactcaa
cattttctcgtctggaaactcttaaatccgtcgataaatggaatgacactcacagaaagt
ggccagatagttcccgagttttcaactgccgccattgttgttcataatccggttgcacag
tattttaccctgtaa
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