Nocardia farcinica NCTC11134: ERS450000_05360
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Entry
ERS450000_05360 CDS
T04524
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
Organism
nfr
Nocardia farcinica NCTC11134
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
CRY83198
UniProt:
A0A0H5P6S6
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Position
p2:complement(2007011..2010412)
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AA seq
1133 aa
AA seq
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MTRKGTILSKITIEQEPGLTDTMLTAELDTTHTPPTFAELGVRDEIVRALAEIGIERTFA
IQELTLPLALAGEDLIGQARTGMGKTFGFGVPLLHRIATADSGTTPLDGTPRALVIVPTR
ELCIQVTDDLVRAGKYLRNHKGALKVTAIYGGRPYDSQIAALREGVDVVVGTPGRLLDLA
KQNHLILGKIGVLVLDEADEMLDLGFLPDIERILTMVPAKRQTMLFSATMPGPIITLART
FLTRPTHIRAEEPHDSAVHDRTAQFVYRAHALDKAELIARVLQAEGRGATMIFTRTKRTA
QKVADDLAERGFAVGAVHGDLGQVQREKALDKFRKGVIDVLVATDVAARGIDIDDVTHVI
NYQCPEDEKTYVHRIGRTGRAGRTGVAVTLIDWDELNRWAAIDAALGLGIPEPVETYSRS
PHLFSDLGIPEGVTGKVRRAAPARTADETVAERPARTPRKRNRRRTLRGKPIDATQNGGA
PDGVSPNGAAENGEPLDETAAVADAAPTPSQSQEHGGGEGGSSSRRKRRRRRRGSSSEAN
AVVQQVDSTADSAAGDTGRAPTETTPVTAADEAGTTATSAGLDTEPTVAAEPTVAEPTGA
TERPARRRTRKGTATADDSRPADSADSAEGAATDATADATAAVAAATAEEATGAPAAPRR
RTRTRAATATAGTADATAPEAGTATTVDAGTIAAPADTGSAAAPADSGSGTASADSAPAA
GDNGTAPAAGDIGTAPAATEAAPRRRTRKAATAASADAASNDAGTPDAASATGSTGAAAT
SSEETPAPRRRTRKAASATPAADTTTGDAASASDPVHAGDAAAPSEEAPAPRRRTRKAAT
EDVVAATATADTGEAATSSEEAPAPRRRTRKATTATPAAATATDAVSATAAASTGEAAAP
SEEAPAPRRRTRKVTTAPADLTAAQAADTSTADLTAPTASTAADGGAASSAAAAPADTAS
ADAAPAPRRRATRKSAAATAETGAATVSTADPAAAADTPASGQAPADDATATTDAEPAPR
RRTRKTATTTADTEAPATADAEPAPRRRTRKATTTTADTEATATTDADATPRRRTRKTAD
TEATESAEGAAPRRRTRTADEPESGAQPAPKRTRKKAAGEQQVEVTAGSSASA
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggaaaggcacgatcctgagcaagatcaccatcgagcaggaacccggtctgacg
gacacgatgctgaccgccgaactggacacgactcacactcccccgactttcgccgaattg
ggggtccgcgacgaaatcgtgcgcgcgctcgccgagatcggcatcgaacgcactttcgcg
attcaggaactcaccctgccgctggcgctggccggcgaggacctcatcggccaggcccgc
accggcatgggcaagaccttcggtttcggcgtgccgctgctgcaccgcatcgccaccgcc
gactccggcaccacgcccctggacggcaccccgcgcgcgctggtgatcgtgccgacccgg
gagctgtgcatccaggtcaccgacgatctggtgcgagcgggcaagtacctgcgcaaccac
aagggcgcgctgaaggtgaccgccatctacggcggccgaccctacgactcccagatcgcc
gcgctgcgcgagggcgtcgacgtggtcgtcggcacgcccggccgcctgctcgatctggcc
aagcagaaccacctcatcctcggcaagatcggcgtgctggtgctcgacgaggccgacgag
atgctggatctgggcttcctgcccgatatcgagcgcatcctcaccatggtcccggccaag
cggcagaccatgctgttctcggccaccatgccgggcccgatcatcaccctggcccgcacg
ttcctcacccgcccgacccacatccgggccgaggagccgcacgattcggccgtgcacgac
cgcaccgcgcagttcgtctaccgcgcgcacgcgctggacaaggccgaactgatcgcacgg
gtgctgcaggccgaggggcgcggcgccaccatgatcttcacccgcaccaaacgcaccgcc
cagaaggtggccgacgacctggccgagcgcggtttcgccgtcggcgccgtgcacggcgat
ctcgggcaggtgcagcgcgagaaggcgctggacaagttccgcaagggcgtcatcgacgtg
ctcgtcgcgaccgatgtcgccgcgcgcggcatcgacatcgacgacgtcacccacgtcatc
aactaccagtgccccgaggacgagaagacctacgtgcaccgcatcggccgcaccggccga
gcgggccgcaccggcgtcgcggtgaccctcatcgactgggacgagctcaaccgctgggcc
gccatcgacgccgccctcggcctcggcatcccggaaccggtcgagacgtattcgcgctcc
cctcacctgttttcggatctgggcattcccgaaggggtcaccggcaaggtccgccgcgcc
gccccggcacgcaccgcggacgagaccgtcgccgagcgtccggcccgcaccccgcgcaag
cgcaaccgcaggcgcacgctgcgtggcaagccgatcgatgcgacgcagaacggtggcgca
ccggacggtgtgtccccgaacggtgccgccgagaacggtgaaccgctggacgagaccgcg
gcggtagcggacgcggccccgacaccgtcgcagagccaggagcacggcggcggcgaaggt
ggttcgtcgtcgcggcgcaagcgcaggcgtcggcggcgcgggtcgtcgtccgaagcgaat
gccgttgtgcagcaggtcgattcgaccgccgactcggcggccggcgataccggccgggcc
ccgacggagaccaccccggtcaccgcggccgacgaggcgggcaccaccgcgacctccgcc
ggcctcgatacggaaccgacggtcgccgcggaaccgacggtcgccgagcccacgggggcg
acggaacgtcccgcccgacgccggacccggaagggcaccgcgacggccgacgacagccgc
ccggccgactcggccgactcggccgaaggcgccgccaccgacgccaccgccgatgccacc
gctgcggttgccgcagcgaccgcggaggaagcaaccggcgcgcccgcggctccccgccgc
cgcacccgcacccgcgcggccaccgccaccgccggcacggccgatgcgaccgcacccgag
gcgggcaccgcgacaacggtcgacgccggcaccatcgcggccccggcggacaccggcagt
gccgcggctccagccgacagcggcagcggcacggcatccgccgacagcgccccggcagcg
ggtgacaacggcaccgccccggcggcgggtgacatcggcaccgctccggcggcgaccgag
gccgctccccgccgacgcacgcgcaaggcagccacggccgcctcggccgacgccgcctcg
aacgacgccggcacgcccgatgccgcctcggcaaccgggagcaccggcgcagcggcgaca
tcgagcgaggagacaccggcaccgcgccgacgcacccgcaaggccgcctcggcgactccg
gccgcggacacgaccaccggggacgcggcctcggcttcggacccggtgcacgccggtgac
gcggcggcgccgagcgaggaagcacccgcaccgcgccgacgcacgcgcaaggcggccacc
gaagacgtcgtcgcggccacggccaccgctgataccggcgaagcggcgacatcgagcgag
gaagcaccggcaccccggcgacgcacccgcaaggccaccaccgcaactccagccgcggcc
accgcgaccgacgcggtctcggcgacagcggccgcgagcaccggcgaagcggcggcaccg
agcgaggaagcaccggcaccccgccgacgcacccgcaaggtcaccaccgcaccggccgat
ctgaccgctgcccaagcggcggacacatcgacggccgacctgaccgccccgacggcgagc
actgcggctgatggcggagcggcaagcagcgcggccgccgctccggcggataccgcctcc
gccgacgcggcaccggccccgcggcgccgcgccactcggaagtcggccgccgcgacggcc
gagaccggtgccgcgaccgtctcgaccgccgaccccgcggccgcggccgataccccggcg
tccgggcaggcacccgccgatgacgcgacggcaaccaccgacgccgaaccggcaccacgc
cgccgcacccggaagaccgccaccacgacggccgacaccgaggcaccggcaaccgccgac
gccgaaccggcaccacgccgccgcacccggaaggccaccaccacgacggccgacaccgaa
gcgacggcaaccaccgacgccgacgccacaccgcgccgccggacgcggaagacggctgac
accgaggcgactgagtcggcggagggcgctgccccacggcggcggacccgcacggccgac
gagcccgaatcgggtgcgcagcccgctccgaagcggaccaggaagaaggcggcgggcgag
cagcaggtggaggtgacggcggggtcgtcggcttcggcgtag
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