Nocardia farcinica NCTC11134: ERS450000_05715
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Entry
ERS450000_05715 CDS
T04524
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ERS450000_05715 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfr03400
]
ERS450000_05715 (ung)
Enzymes [BR:
nfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ERS450000_05715 (ung)
DNA repair and recombination proteins [BR:
nfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ERS450000_05715 (ung)
Prokaryotic type
ERS450000_05715 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CRY83843
UniProt:
A0A0H5P8T9
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All DBs
Position
p2:2386633..2387316
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AA seq
227 aa
AA seq
DB search
MGAKPLSEIMDPGWAQALEPVADRIRAMGDFLRAENAAGRGYLPAGENVLRAFQRPFRDV
RVLIVGQDPYPTPGHPMGLSFSVAPDVSPIPRSLANIFAELHKDLGHPTPSCGDLTPWSD
QGVLLLNRVLTVSPGQPASHRGKGWEAVTEQAIRALVARDEPLVAILWGRDAATLKPLLT
EAEVPYIESAHPSPLSASRGFFGSRPFSRANELLDELGAEPVDWRLP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgaaaccactgtcggaaatcatggatccgggctgggcgcaggcgctggagccg
gtggccgaccgcatcagggcgatgggtgatttcctgcgggccgagaacgcggccggacgc
ggctacctgcccgcgggcgagaatgtgctgcgcgcgttccagcggccgttccgcgacgtg
cgggtgctgatcgtcggccaggacccctacccgacgccggggcacccgatgggcctgagt
ttctcggtggcgccggatgtttcgccgattccacgcagcctggccaacatcttcgccgaa
ctgcacaaggacctcggccacccgacaccctcctgcggcgacctcaccccgtggtcggat
cagggtgtgctgctgctgaaccgggtgctcacggtctcgcccggccagccggcctcccat
cgcggcaaggggtgggaggcggtgaccgagcaggccatccgcgcgctggtcgcccgggac
gaacccctggtcgcgatcctctggggccgcgacgccgccaccctgaagccgctgctcacc
gaggccgaggtgccctacatcgaatcggcccatccctccccgctgtcggcgtcgcgggga
ttcttcggctcccggccgttctcgcgggccaacgaactgctcgacgaactcggcgccgag
ccggtcgactggcgcctgccctga
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