KEGG   Nothobranchius furzeri (turquoise killifish): 107375893
Entry
107375893         CDS       T05163                                 
Symbol
ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
  KO
K17043  ATP-dependent RNA helicase DDX43 [EC:3.6.4.13]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nfu03041]
    107375893 (ddx43)
Enzymes [BR:nfu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     107375893 (ddx43)
Spliceosome [BR:nfu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    107375893 (ddx43)
SSDB
Motif
Pfam: DEAD Helicase_C KH_1 KH_2 MOEP19 ResIII KhpA-B_KH CMS1
Other DBs
NCBI-GeneID: 107375893
NCBI-ProteinID: XP_015800199
UniProt: A0A8C6L757
LinkDB
Position
sgr03:complement(29610131..29650373)
AA seq 695 aa
MSDWEDEYDRDGVAIEKPAPKPTTHSSCLPRNDRQRGGSVSFGVKSGKPAFGEFKERKGD
RGRDGYEFRNRRGRVHGGLQADKSESSAVTITVESSSIGRVIGRGGAKIRELEENSGAKI
KINKGDYDGEVVIFGSSAAQQKAKEMIEDLVASGDSRFSSHGGRGAYSDAGGYGERFSGK
ADQGPSNDSVWSKAALEASKVAPSPPSIDWNAVRENRKIYAELKWKDLPPIKKNFYTEAE
SVSVLSPEEVSEWRKENNNIFVDDLKEEGPKRPIPSPCRTFLEAFELFPEIMENIEQVGF
AKPTPIQSQAWPVILIGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPVPRSEQDGPGMLVL
TPTRELALQIEAECSKYQYKGYKSICIYGGGDRRGQINLVRSGVDIVIATPGRLNDLQMN
DLINLRSITYVVLDEADRMLDMGFEPQILKILLDVRPDRQTVMTSATWPTGVRRLAKSYL
KNPMMVYVGTLDLAAVGTVQQKLLIVQEEEKKSYLFDFIRSMQPHDKVLVFVGKKLLADD
LSSDIALQGIAVQCLHGDREQSSREEALADFKESRVRILVATDLASRGLDVHDITHVFNY
DFPRNIEEYVHRVGRTGRAGRTGAAITLLTRENWRMAPELIPILERAEQEVPEELVLMAE
RYEKHKRERDLSNPRGGGRGGGWGRRGGRDRDWGF
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgtcggactgggaggatgagtatgacagggacggcgttgcaattgagaagcctgccccg
aaacctaccacacattcctcttgcttacctagaaatgaccgacagagaggaggaagtgtt
tcttttggagtaaagagtggcaaacccgcatttggagagttcaaggagcggaaaggtgac
cgcggcagggatggatacgagttcaggaatcggagaggacgagttcacggaggtcttcag
gctgataagtcggagtcttctgctgtcacaatcacagtggaaagttcctctatcggaagg
gtgataggtcgaggcggagcaaaaattcgtgaacttgaggagaacagtggagcaaaaatc
aagataaacaaaggcgattatgatggagaagtggtcatttttggatcctcagctgctcag
caaaaggccaaagagatgatcgaagacttggtagcaagtggcgactctcgatttagcagt
catggtggtagaggagcatactctgatgcaggaggttatggagaaaggttcagcggaaaa
gcagatcaaggaccaagcaatgactctgtctggtccaaagcagctttagaggcctcaaaa
gttgctccgtctccaccatccatagactggaatgctgtccgggagaacaggaagatctac
gcagagctcaagtggaaagacctaccacccattaagaagaacttttacactgaagcagaa
agtgtgtccgtgctctctcctgaggaagtcagtgagtggaggaaggaaaacaacaatatc
tttgtggatgacttgaaggaggaggggccgaagcgtcccattcctagtccctgtcgcaca
tttctggaggcctttgagcttttcccagagatcatggaaaacattgaacaagttggcttt
gccaagccaacccctatccagtctcaggcatggccggtaatcctcattggggaggacctg
atagcgatagctcaaacaggaacggggaaaactctggcttacctgctgccagggttcatc
cacatggacgggcagcctgtaccgagatctgagcaggacggtccaggcatgttggtgctg
actcccactagagagctggccctccagattgaagcggagtgcagcaagtaccagtacaag
ggatacaaaagtatttgtatttatggaggaggtgacaggagaggccagatcaacctggtt
cggagcggcgtggatattgtgatcgctactccaggacgtctgaacgatttacagatgaat
gacctcatcaatcttcgctccatcacttatgtggtgttggatgaggctgaccgcatgctg
gatatgggcttcgaaccccagatcctgaagattcttctggatgtacgtccggaccgacag
actgttatgaccagcgccacttggcctacaggtgtgagaagactggccaaatcctacctg
aagaatcccatgatggtttacgtgggcaccctggacctggctgctgtcggcacggtgcag
caaaaactgcttattgttcaggaagaggagaaaaagtcctatctgtttgacttcataaga
agcatgcagccccacgataaagtactggtctttgtgggcaagaagctcttagctgatgat
ctatcaagtgacattgctctgcaaggcatcgctgtgcagtgtctccatggtgaccgtgag
cagagttcccgtgaagaggcacttgctgattttaaagagagcagggttcgcatcctagtc
gccacagacctggcttctcgagggttggacgtccatgacatcacacatgtctttaactat
gacttcccacggaacatagaggagtatgtccatcgtgtgggtcgtacaggccgagcaggg
cgaacaggtgctgccattactctcttaaccagagaaaactggaggatggccccagagctg
attcccatcttggagcgagcagaacaagaagtccctgaggagctggtgctcatggcagaa
aggtatgagaaacacaagagggagagggatttgagtaacccaagaggaggaggaagagga
ggaggatggggaaggagaggtggcagagaccgagactggggattctaa

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