Nothobranchius furzeri (turquoise killifish): 107375893
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Entry
107375893 CDS
T05163
Symbol
ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
3.6.4.13
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107375893 (ddx43)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
107375893 (ddx43)
Spliceosome [BR:
nfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107375893 (ddx43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
KH_2
MOEP19
ResIII
KhpA-B_KH
CMS1
Motif
Other DBs
NCBI-GeneID:
107375893
NCBI-ProteinID:
XP_015800199
UniProt:
A0A8C6L757
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Position
sgr03:complement(29610131..29650373)
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AA seq
695 aa
AA seq
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MSDWEDEYDRDGVAIEKPAPKPTTHSSCLPRNDRQRGGSVSFGVKSGKPAFGEFKERKGD
RGRDGYEFRNRRGRVHGGLQADKSESSAVTITVESSSIGRVIGRGGAKIRELEENSGAKI
KINKGDYDGEVVIFGSSAAQQKAKEMIEDLVASGDSRFSSHGGRGAYSDAGGYGERFSGK
ADQGPSNDSVWSKAALEASKVAPSPPSIDWNAVRENRKIYAELKWKDLPPIKKNFYTEAE
SVSVLSPEEVSEWRKENNNIFVDDLKEEGPKRPIPSPCRTFLEAFELFPEIMENIEQVGF
AKPTPIQSQAWPVILIGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPVPRSEQDGPGMLVL
TPTRELALQIEAECSKYQYKGYKSICIYGGGDRRGQINLVRSGVDIVIATPGRLNDLQMN
DLINLRSITYVVLDEADRMLDMGFEPQILKILLDVRPDRQTVMTSATWPTGVRRLAKSYL
KNPMMVYVGTLDLAAVGTVQQKLLIVQEEEKKSYLFDFIRSMQPHDKVLVFVGKKLLADD
LSSDIALQGIAVQCLHGDREQSSREEALADFKESRVRILVATDLASRGLDVHDITHVFNY
DFPRNIEEYVHRVGRTGRAGRTGAAITLLTRENWRMAPELIPILERAEQEVPEELVLMAE
RYEKHKRERDLSNPRGGGRGGGWGRRGGRDRDWGF
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactgggaggatgagtatgacagggacggcgttgcaattgagaagcctgccccg
aaacctaccacacattcctcttgcttacctagaaatgaccgacagagaggaggaagtgtt
tcttttggagtaaagagtggcaaacccgcatttggagagttcaaggagcggaaaggtgac
cgcggcagggatggatacgagttcaggaatcggagaggacgagttcacggaggtcttcag
gctgataagtcggagtcttctgctgtcacaatcacagtggaaagttcctctatcggaagg
gtgataggtcgaggcggagcaaaaattcgtgaacttgaggagaacagtggagcaaaaatc
aagataaacaaaggcgattatgatggagaagtggtcatttttggatcctcagctgctcag
caaaaggccaaagagatgatcgaagacttggtagcaagtggcgactctcgatttagcagt
catggtggtagaggagcatactctgatgcaggaggttatggagaaaggttcagcggaaaa
gcagatcaaggaccaagcaatgactctgtctggtccaaagcagctttagaggcctcaaaa
gttgctccgtctccaccatccatagactggaatgctgtccgggagaacaggaagatctac
gcagagctcaagtggaaagacctaccacccattaagaagaacttttacactgaagcagaa
agtgtgtccgtgctctctcctgaggaagtcagtgagtggaggaaggaaaacaacaatatc
tttgtggatgacttgaaggaggaggggccgaagcgtcccattcctagtccctgtcgcaca
tttctggaggcctttgagcttttcccagagatcatggaaaacattgaacaagttggcttt
gccaagccaacccctatccagtctcaggcatggccggtaatcctcattggggaggacctg
atagcgatagctcaaacaggaacggggaaaactctggcttacctgctgccagggttcatc
cacatggacgggcagcctgtaccgagatctgagcaggacggtccaggcatgttggtgctg
actcccactagagagctggccctccagattgaagcggagtgcagcaagtaccagtacaag
ggatacaaaagtatttgtatttatggaggaggtgacaggagaggccagatcaacctggtt
cggagcggcgtggatattgtgatcgctactccaggacgtctgaacgatttacagatgaat
gacctcatcaatcttcgctccatcacttatgtggtgttggatgaggctgaccgcatgctg
gatatgggcttcgaaccccagatcctgaagattcttctggatgtacgtccggaccgacag
actgttatgaccagcgccacttggcctacaggtgtgagaagactggccaaatcctacctg
aagaatcccatgatggtttacgtgggcaccctggacctggctgctgtcggcacggtgcag
caaaaactgcttattgttcaggaagaggagaaaaagtcctatctgtttgacttcataaga
agcatgcagccccacgataaagtactggtctttgtgggcaagaagctcttagctgatgat
ctatcaagtgacattgctctgcaaggcatcgctgtgcagtgtctccatggtgaccgtgag
cagagttcccgtgaagaggcacttgctgattttaaagagagcagggttcgcatcctagtc
gccacagacctggcttctcgagggttggacgtccatgacatcacacatgtctttaactat
gacttcccacggaacatagaggagtatgtccatcgtgtgggtcgtacaggccgagcaggg
cgaacaggtgctgccattactctcttaaccagagaaaactggaggatggccccagagctg
attcccatcttggagcgagcagaacaagaagtccctgaggagctggtgctcatggcagaa
aggtatgagaaacacaagagggagagggatttgagtaacccaagaggaggaggaagagga
ggaggatggggaaggagaggtggcagagaccgagactggggattctaa
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