Nothobranchius furzeri (turquoise killifish): 107377586
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Entry
107377586 CDS
T05163
Symbol
fdft1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00100
Steroid biosynthesis
nfu01100
Metabolic pathways
Module
nfu_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107377586 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nfu01006
]
107377586 (fdft1)
Enzymes [BR:
nfu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
107377586 (fdft1)
Prenyltransferases [BR:
nfu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107377586 (fdft1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
HAUS4
TM1266-like
Motif
Other DBs
NCBI-GeneID:
107377586
NCBI-ProteinID:
XP_015802772
UniProt:
A0A1A8AVG8
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Position
sgr04:48861748..48868465
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AA seq
417 aa
AA seq
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MDILKSLGHPEEILNLFKFKMGGCRSVMTKLDYGSMSESLRTCYLYLNQTSRSFAAVIQA
LDGELRHAVCIFYLVLRALDTVEDDMTISLEKKVPMLNNFYTYLYQEEWCFTESQEKDRR
VLEDFPTISLEFRNLAQEYRDVISDICHQMGVGMAEFLEKNVGSMKEWDQYCHYVAGLVG
IGLSRLFSASQLEDPEVGRDIKLANSMGLFLQKTNIIRDYLEDTREGRAFWPKEAWSQFA
SELEDLAQPEKLESALSCLNLLVTDALHHVPDVIAYLSRLRNQSVFNFCAIPQVMAIATL
STCYNNPMVFQGVVKIRKGQAVTLMMEATNMRAVQTIITQYSQEILQKVSLTDPLRDKTL
HILAVIQETSALPQSSFSSRTHHLSPMYLSAAMLLAAFSWQYLSTTAAQAQGTGDMQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctgaagtcactgggacacccggaagagattttgaacctgttcaaatttaag
atgggaggatgtcgatccgtcatgacaaaattggattatgggtccatgagcgagagtctg
cgaacctgttacttgtatctgaaccagaccagccggagctttgcagccgtgatccaggcg
ctggacggggagctgagacatgcagtttgcatcttctacctggtgctgcgagcgctggac
acagttgaggacgacatgaccatctctctggagaagaaggtgcccatgctgaacaatttc
tacacctacctgtaccaggaggagtggtgcttcaccgagagccaggagaaggatcggcga
gttctggaggatttccccacgatctcgctggaattcagaaacctcgctcaggaatacaga
gacgtcatctcggacatttgccaccagatgggagtcggaatggctgaattcttggagaag
aacgtaggatccatgaaggaatgggaccagtactgccactacgttgccggtctggtcggc
atcggcctgtcgaggctcttctctgcctcccagctggaggatcccgaggttggacgggac
ataaagctggccaactccatgggcctgttcctgcagaagaccaacatcatccgagactat
ctggaggacacacgagaaggacgtgccttctggccaaaagaggcatggagccagttcgcc
agtgagcttgaggatttggctcagcctgagaaactggagtcagctttgtcctgcctcaac
ttgctggtcacagacgctctgcaccacgttcccgacgtcatcgcctacctgtcccgcctg
cgcaaccaaagcgtctttaacttctgtgccattccacaagtgatggcgatagcgaccctc
tccacatgctacaacaaccccatggtgtttcagggcgtggtgaagatcagaaagggacag
gctgtcacgctcatgatggaggccaccaacatgagagctgtgcagaccattatcacccag
tacagtcaggagattttacagaaggtctccctcaccgacccgttgcgggacaagacgctg
cacatcctggctgtaatccaggagacgtccgctctgccgcagtccagcttctcctccagg
acccaccacttgtctccgatgtacctgtcggccgccatgctgctggctgctttcagctgg
cagtacctcagtacgaccgcagctcaggcgcaagggacaggagacatgcagtga
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