Nothobranchius furzeri (turquoise killifish): 107378547
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Entry
107378547 CDS
T05163
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107378547 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107378547 (gabra4)
Ion channels [BR:
nfu04040
]
Ligand-gated channels
GABA-A
107378547 (gabra4)
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
107378547
NCBI-ProteinID:
XP_015804342
UniProt:
A0A9D2YW64
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Position
sgr01:complement(2893611..2930681)
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AA seq
557 aa
AA seq
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MVSAHKKEMVTARRAAASVRALIYFFCLTTCVKKICGQTKRDDKIYPENFTRILDRLLDG
YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLLYEGPIEILR
LNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLVD
FPMDGHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKS
ITGEYVVMTVHFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT
MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQIERARKKPSKC
PPVPQTTPVKLKDAEEVLQQTPDTNGSLRKRLNYISHPEQSGQQRAQSTTNISGLGRGRP
LRPTAAGANGSSSTLSRSSPKSESLLSVASSSAQLVKGTPQAAASTPDVMVGTPCKQDVS
ASSLQHLLGPKLERLQMMGNKLEPKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGAFNM
VYWVVYLSKDTMVAKDG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgcacacaagaaggagatggtgacagcgaggcgagctgctgcctcggttcgt
gccctgatctacttcttctgcctgaccacttgtgtcaagaaaatctgcggacaaacaaag
agggatgataagatttatccggagaattttactcgcattttggaccgacttctggacggc
tatgacaacaggctgcgacctggatttggaggccctgtgaccgaggtcaagacggacatc
tatgtgacaagttttgggccggtctcagatgttgaaatggaatacacgatggacgtgttc
tttcgccagacgtgggtggaccggaggttgctgtacgaaggcccaatagagattctgagg
ctaaacaacctgatggtgactaaagtctggactccagacacttttttcaggaacggcaaa
aggtctgttgctcacaacatgaccgctcctaacaaactcttccggatcatgaagaacggc
accatcctttacaccatgaggctgaccatcagtgctgagtgtcccatgaagcttgtggac
ttccccatggatggacatgcatgtcccctcaagtttggaagctatgcttatcccaaaaca
gagatgatctacacttggaccaaagggcctcagcactcggtggaggtcccgcctgagtcc
tccagcctggttcagtatgatctcatcggccagaccgtctccagtgaaaccatcaagtcc
atcacaggtgaatacgtggtaatgacggttcacttccacctgaaacgcaaaatgggctac
ttcatgattcagacctatatcccctgcataatgacagtaatcctctctcaagtgtccttc
tggatcaataaggagtcggtcccggcccggaccgtgtttggcatcacgactgtcctgacc
atgacgacactcagcatcagcgcccgccactctcttcctaaggtctcgtacgcgactgcg
atggactggttcattgccgtctgcttcgcctttgtcttctctgccctcattgagtttgct
gctgtcaactacttcaccaatgcacagattgagcgggccagaaagaagccatccaaatgt
ccccctgtgccccaaaccacgcctgtcaagctgaaggacgcggaagaagtgctgcagcaa
acccctgacaccaacggctctctgagaaagcgactcaactacatttcacacccggagcag
agcggtcagcagagagcccagtccaccaccaacatctcaggtttaggacgaggcagacca
ctgagacctacagccgctggcgccaatggcagttcctccacgctgtcccgctctagtccg
aaatccgagagtctgctgagcgtggcctcctcctccgcccagctggtgaagggcacccct
caagcagctgcctccactcctgatgtgatggtggggacgccgtgcaagcaggacgtcagc
gcctcgtctctgcagcatctgctggggcccaagctggagcgtcttcagatgatggggaac
aaactggagccaaagcagacgccatgctctcagcccaccactgctggcatgggtggaacc
agtaaaatagacaaatacgcacggatcctgttcccggtgtcttttggggcatttaatatg
gtctactgggtggtctacctatctaaggacaccatggtggccaaggatggctag
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