KEGG   Nothobranchius furzeri (turquoise killifish): 107380026
Entry
107380026         CDS       T05163                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03410  Base excision repair
nfu04140  Autophagy - animal
nfu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107380026
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    107380026
  09143 Cell growth and death
   04217 Necroptosis
    107380026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nfu03036]
    107380026
   03400 DNA repair and recombination proteins [BR:nfu03400]
    107380026
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nfu04147]
    107380026
Chromosome and associated proteins [BR:nfu03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    107380026
DNA repair and recombination proteins [BR:nfu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     107380026
   MMR (mismatch excision repair)
    Other MMR factors
     107380026
Exosome [BR:nfu04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   107380026
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_box_5 Ets
Other DBs
NCBI-GeneID: 107380026
NCBI-ProteinID: XP_015806509
UniProt: A0A1A8U9L7
LinkDB
Position
sgr06:complement(8072545..8077811)
AA seq 196 aa
MVKDPSKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFE
DMAKQDKLRYEKEMKNYIPPKGQRKKRFKDPNAPKRPPSAFFLFCADFRPKVKGENPGLS
IGDTAKKLGEMWNSSSAEEKQPYEKKAAKLKEKYDKDIVAYRTKGKVDSASAAAADDDDD
DEEEGEEEEEEEEDDE
NT seq 591 nt   +upstreamnt  +downstreamnt
atggtgaaggatccgagtaagccgaggggcaaaatgtcctcatatgcctactttgtgcag
acatgcagagaggagcacaagaagaagcatcccgatgcatctgtcaacttctcagagttt
tccaaaaaatgctcagagcgatggaagacgatgtcaccaaaagagaagggcaagtttgaa
gacatggccaagcaggacaagctgcgttatgagaaggaaatgaagaattacatcccccct
aagggtcagaggaagaagcggttcaaggacccgaacgcccccaagagaccaccgtctgct
ttctttcttttctgcgccgacttccgccccaaggtaaaaggtgagaatcctggactgtcc
attggggatacggcaaagaagcttggagagatgtggaacagctcatcggcagaagagaag
cagccgtacgaaaagaaggcagctaagttgaaggagaaatatgacaaggatatcgtggct
taccgcacgaagggtaaggtggattctgcatccgccgctgcagctgatgacgatgatgat
gatgaagaggagggagaggaggaggaagaagaggaagaagatgacgagtag

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