Nothobranchius furzeri (turquoise killifish): 107380026
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Entry
107380026 CDS
T05163
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03410
Base excision repair
nfu04140
Autophagy - animal
nfu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107380026
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107380026
09143 Cell growth and death
04217 Necroptosis
107380026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107380026
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107380026
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107380026
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
107380026
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107380026
MMR (mismatch excision repair)
Other MMR factors
107380026
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
107380026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_box_5
Ets
Motif
Other DBs
NCBI-GeneID:
107380026
NCBI-ProteinID:
XP_015806509
UniProt:
A0A1A8U9L7
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All DBs
Position
sgr06:complement(8072545..8077811)
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AA seq
196 aa
AA seq
DB search
MVKDPSKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFE
DMAKQDKLRYEKEMKNYIPPKGQRKKRFKDPNAPKRPPSAFFLFCADFRPKVKGENPGLS
IGDTAKKLGEMWNSSSAEEKQPYEKKAAKLKEKYDKDIVAYRTKGKVDSASAAAADDDDD
DEEEGEEEEEEEEDDE
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggatccgagtaagccgaggggcaaaatgtcctcatatgcctactttgtgcag
acatgcagagaggagcacaagaagaagcatcccgatgcatctgtcaacttctcagagttt
tccaaaaaatgctcagagcgatggaagacgatgtcaccaaaagagaagggcaagtttgaa
gacatggccaagcaggacaagctgcgttatgagaaggaaatgaagaattacatcccccct
aagggtcagaggaagaagcggttcaaggacccgaacgcccccaagagaccaccgtctgct
ttctttcttttctgcgccgacttccgccccaaggtaaaaggtgagaatcctggactgtcc
attggggatacggcaaagaagcttggagagatgtggaacagctcatcggcagaagagaag
cagccgtacgaaaagaaggcagctaagttgaaggagaaatatgacaaggatatcgtggct
taccgcacgaagggtaaggtggattctgcatccgccgctgcagctgatgacgatgatgat
gatgaagaggagggagaggaggaggaagaagaggaagaagatgacgagtag
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integrated database retrieval system