Nothobranchius furzeri (turquoise killifish): 107381944
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Entry
107381944 CDS
T05163
Symbol
stab1
Name
(RefSeq) stabilin-1
KO
K19020
stabilin-1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107381944 (stab1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107381944 (stab1)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Hyaluronan
Cell surface receptors
107381944 (stab1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
cEGF
Motif
Other DBs
NCBI-GeneID:
107381944
NCBI-ProteinID:
XP_015809365
UniProt:
A0A1A8AHE0
LinkDB
All DBs
Position
sgr07:complement(45134249..45415388)
Genome browser
AA seq
2533 aa
AA seq
DB search
MFLLLLLLLKICMQASAQEQTAASGRCDIPQRVDINTDCTSCAAVLTASCPHGFTKVGST
NCSYVVQIGNREVELQGCQHVCVKTVLHHQCCVGHWGPLCLPCPSWSGRTCNFNGVCSDG
NLGNGTCVCNEGFSGFACHKCRSPNTFGEKCDKECDCMNGVCNQGPDGDGVCLCQPPFSG
KRCDRVNSRCSSCGPFSYCKGDGDDAECACLPGHRKMLHNKCSAVCSQASCDVNARCSLQ
GSKVKCTCKANYEGDGRICVPRNPCLENNGGCPINSTVCVFRGPNNFSCECMSGMLPVGG
SIESGCQLQSACSPDTCDPTALCQTHLDGKPRCVCELGHIGDGRRCYGDLMERLTELDSS
GGLKGNLTGAVALFERGCSKVLRRSGPFTAFFPLLKDPLTGVKEEVVCKNHLILGQHLLR
DLQGRDFHLYGGEQLRVNVNKRLILLNNPSQVYSIIQSDLPGANGIIHIIDRPLTLSDTS
REEYQFYDQTIGEILTKDQKFNRFLSLVDNCGAPPPLRGPGPLTVFVPTNEAVDRARDGS
ILYMLNDAKSKLQELLRHHVFSHASLTVDEMATLPHIQTMANQLVSITLSDNGQIMLGEK
LIPLATTNIMASNGVIHMIDGLLYPTSILPILPHRCDVTDSKIIMGPCVHCSFLKETRCP
EGSVELHSHQTGCEYTQLTLKYTSSKGCAKYCNTTRQVPECCKGFYGPDCKPCIGGFQHP
CYDKGSCFDGIHGNGSCICHSGFKGFACHICADPAKHGESCDEECHCVHGVCDNRPGSGG
ACRRGSCLNGYSGEFCDKTATPCNADGLLQHCHIHAYCTHTGLDTTCVCRYGYEGDGHSC
SPINLCLKSSRGDCDTNAECVFVGPGNVSCVCSEGWTGDGKVCVEINNCQLDGRGGCSPN
ADCNHIGPGQSECVCKTGYMGNGKVCDLISPCLTNNGGCHDLAKCEQREGRVHTCTCPDG
YAGDGNLCYGSLLDELDMNTKLHNFYKLIQKFSQSSQDLSGNITVLVPSHDVLNNMSTAD
NVFWTSRHRLPHFLRAHFLVGIYSVEDLEGLVGSKIPTLDPSIQWEIRNVSGTIQIGNAS
IVIHNLPAINGYIHVINQIMVPSCSDLPPDPPTLMAFLNSSSNFSLIQRYALMYNLSDRL
KGLDFTLLLPTDEAVRHHLSRTNSSVLDSDSFLYHVIPNELLLPEHLHDGLLKSTLLGSD
YQVQFHLNINQMVVNNVPLNDSFIETQYGLIFILPKVLKVQRNRCSRQVTLQVKGICSDC
DGAPRCLFNYIPIKEKFPPNMKPNCVFRKRVGSRRRSVSGCMITCLRLTTDHSCCPGFYG
HECFKCPGENDNWCSNHGKCQDGNHGNGECRCYEGFHGTACEDCEPGRYGVNCSSKCVCD
HGKCEDGLAGSGKCVCIKGWKGASCSVEIKDDACRGVCDDNANCITGPKGSAAACVCAAG
YEGNGTFCKELDVCGRSNGGCSEFAVCTKLSGGERTCTCKAGYTGDGVVCLEIDGCLVNN
GGCHRAADCIRTGPNVTSCRCRTGFSGSGKLCFPVNPCRTNNGDCSKFARCEYLGQGRRN
CTCFRGHVGDGFVCRGTIKAEVTRQSENAFFRQMLWMSGYSGLHDDGVYTLFVPLEGANN
QSTVEEWRRSGRLEHLILYHLVPCEILTLSDLKTSVRAISVSGYTLYFSQQQGSVWINNV
SRIVKSDYTASNGVIHHIDTMLTPYKLKDRPQLQPKMMNFSTAATVYGYRRFYQLIKDAG
LLPVLQMSIHQPFTFFWPTDKALNSLPTERQRWLYSPNHQDQLTATIKAHIIRNSKLTDI
GQPRKSSTYRTMHGSLVKLSCDRTLVGGVLLNDNSARLVERYMEFKEGLAFGIDQLLEPP
GLGAFCDAVKNRTTYGRCGSCFFPPPCPSSSIYLGNTMLCSRYRPRYTYLDLEPGISRRG
CMRVCQVPSWVSQCCKNHYSRDCKVCPGGVEAPCSRHGDCDDGLTGSGVCRCYKGFRGHS
CQLCASGYYGVNCTACSCGTGRCDEGVDGTGQCICESGWEGDRCQNHIDSVPENCRQCHA
QATCVSHVGCQCKPGFEGNGTFCSLMPPPDLCSEYNGGCDLSADCNQTGLLVNCTCRSGY
RGDGFSCEPINRCVEEQNGGCSDFASCKFTGPNERECECLPGFVGNGVQCLERAVPPTDR
CLEDNGGCDIVATCKDLHYHANTAGVFHIRSTEGKYKMNLSQAEAACQVEGATLATFKQL
GDAQQLGMHLCVAGWMEGGKVGYPTRFPSAKCGDNHVGLVIYKDPVDQGSKFDAYCYRLS
DVSCSCPDGYVGNGDFCNSVLTSVLAANNDFSIFYKLLLDHSGSSSEGKQLVEVLTHRKS
DITLFVPLNSGFTPNQTLSRRDLEYHISANHSRRLFKDLRNQEVIASRLGLNLTVTHCNE
SCTLVNQRLLLEWDIPAVNGIIHVIEAPLTAPSLPMDPGASRRHVQATSTVLAILVMLSV
CALTAIGYYIYTNKMDVFRFHYFKNEDEHTTSPTLFSIPNPLYGGSKAFEEPFGDTCQGA
EPKDLTNTLELDQ
NT seq
7602 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgttattgcttctgttgttaaagatctgcatgcaagcttcagcccaggaacag
actgctgcttctggacgctgtgatatccctcagagggtggacatcaacacagactgtaca
tcctgtgccgccgtccttacagccagctgtcctcatggttttactaaagtgggctccacc
aactgcagctacgtggtgcaaattggcaacagggaggttgagctgcaggggtgtcagcat
gtctgtgtgaagactgtccttcatcatcaatgctgcgtgggacactggggtcctttgtgt
ctcccctgtcccagctggtcgggcaggacctgcaacttcaatggagtgtgttcggatggc
aacttgggtaacggcacctgtgtctgcaacgagggcttttctggcttcgcctgtcacaag
tgcagaagcccaaatacttttggggaaaagtgtgataaagagtgtgactgcatgaatgga
gtgtgtaaccaaggtcctgatggcgatggagtgtgtttgtgccagccaccattctctgga
aagcgatgtgaccgagtcaacagcaggtgcagtagctgtggccccttctcctactgtaaa
ggagatggagatgatgctgaatgtgcttgtttacccggtcaccggaagatgttacacaat
aaatgttcagctgtttgttcgcaggccagctgtgacgtcaacgcccggtgctctctacag
gggtcaaaggtcaaatgcacctgtaaggccaactacgagggtgatggcaggatctgcgta
ccaagaaatccctgcttggaaaacaatggagggtgtcccatcaattccacagtgtgtgtc
ttcaggggtccaaacaatttcagctgtgagtgcatgtcaggcatgttgcctgtagggggc
agtatcgagtcaggatgccagctgcagtcagcctgctcacctgatacctgtgacccaaca
gcattgtgtcagacccacctggatgggaaacccagatgtgtgtgtgagttaggtcacatt
ggagacggcaggcgttgctacggtgacctgatggagcgcctaacggagctggactcgagc
ggcggcctgaaggggaacctgacgggagcagtggcgttgttcgagagaggatgctcaaag
gttctgaggcggtctggacccttcacagctttcttccctctgctgaaggatcctctgact
ggtgttaaggaagaggtagtgtgtaaaaaccaccttatcctgggtcagcacctcctcaga
gacctgcagggacgagactttcatctttatggaggagaacaactaagggtcaatgtcaac
aagaggctcatcctactgaacaaccctagccaggtgtactccatcatccagtcagacttg
ccaggggctaacgggattatccacatcattgaccggccactcacgttgtctgacacttcc
cgcgaggaataccagttttatgaccagaccattggggagattctgaccaaggaccaaaaa
ttcaaccgcttcctgtctttggttgataactgtggggcacctcctcctctacgtggacca
ggtccattgacggtttttgtccccaccaacgaggctgtggaccgagctcgagacgggagc
atcctgtatatgctgaacgacgctaaatctaaactacaggagctgctcagacaccatgtt
ttctcccatgcctcgctgacagtagatgaaatggctactcttcctcatattcaaacaatg
gccaatcagctggtttccatcaccttgtctgacaacggtcagatcatgctgggggagaag
ctcatccctctggccaccacaaacatcatggcgtctaatggagtcatccacatgattgac
gggctgctttacccgacctccatcctgcccatccttcctcaccgctgtgatgtgactgac
agtaaaatcatcatgggaccgtgcgttcactgcagcttcctcaaggagactcggtgtcca
gaaggcagtgttgagctgcacagccatcagacaggatgtgaatacacccaacttactctt
aaatacaccagcagtaaaggctgcgccaaatactgcaacacaaccagacaggtacctgag
tgctgtaaagggttctacggcccggactgtaaaccgtgtattggaggtttccagcatccc
tgctatgacaaaggatcatgcttcgatggtatccatggcaacggctcatgcatctgccac
tctggattcaaaggttttgcctgccacatctgtgccgatccagccaaacatggagagagc
tgtgatgaagaatgccattgtgtccatggtgtgtgtgataaccgtcctggcagtggcgga
gcgtgtcgaagaggatcttgtctgaacggatactcaggagagttctgtgacaaaacggcc
acgccttgtaacgccgacggcctgctgcaacactgccacatccacgcctactgcactcac
acagggctggacacaacgtgtgtctgcaggtacggctatgaaggtgatggtcactcctgt
tcgcccatcaacctgtgcctgaagagcagccgaggagactgcgacaccaacgcagagtgt
gtgtttgtgggtccaggtaacgtgtcgtgcgtgtgctctgaaggctggacaggtgacggt
aaagtttgtgtggagatcaacaactgtcagctggatggcagaggaggctgcagcccaaac
gccgactgtaatcacatcggacccggacagagtgagtgtgtctgcaagacgggctatatg
ggcaacgggaaagtgtgtgatcttatcagcccctgtctcaccaataacggaggctgccac
gacctggcaaaatgtgagcagagagaaggtagagtccacacctgtacttgtcctgatggc
tacgctggagatggaaacctctgctatggatcattactggatgagctggacatgaatacc
aagctgcacaacttctacaaattgatccagaagttcagccagtcctctcaggacctcagt
gggaacatcacagtactggttccatctcatgacgttctgaacaacatgagtacagctgat
aacgtattctggaccagccgacaccgcctgcctcactttctgcgagctcacttcttggtg
ggaatctattcagttgaagatctggaaggtttggtgggaagcaagattcccactctggac
ccctccatccagtgggaaatcagaaatgtcagtgggacgatccagattggaaatgcatcc
attgtgatccataacctgcctgcaatcaatggctacatccacgtcattaatcagattatg
gtgccatcctgttcagatctccctcctgaccctccaaccttgatggctttcctgaattca
tcctccaacttcagtctgatccagcgatatgctctgatgtacaacctgtcagaccggctg
aagggtttggattttactctccttctgccaactgatgaggccgtcaggcaccatctcagc
aggacaaactcatcagttttggactcagattcgtttctgtaccacgtgattcccaatgaa
ctgcttcttcctgagcacctgcatgatggcctgttgaagagcactctgctgggctccgac
taccaggtccagttccaccttaacatcaaccagatggttgtcaacaatgttcctttgaat
gacagcttcatcgagacacaatatggcctcatcttcatccttccaaaggtgctcaaagtt
caacgcaacagatgcagccgacaggtcaccttgcaggtcaagggaatatgttctgactgt
gatggagctcctcggtgcctcttcaactacatcccaatcaaagagaaatttccccccaac
atgaagcccaactgtgtgttcaggaagcgggttggctccagaaggaggtctgtgtcgggc
tgtatgatcacatgtcttcgcctcaccacggatcactcgtgttgtcctggcttctatggc
catgaatgcttcaaatgtcctggagagaatgacaactggtgctctaaccatggaaagtgc
caggatggtaaccatggcaatggagagtgtcgttgctatgaggggttccatggcactgct
tgtgaggattgtgagccaggccgctatggagtcaactgctcatccaagtgtgtgtgtgac
catgggaagtgtgaagacggtttagcaggaagtggcaaatgtgtttgtatcaaaggttgg
aaaggagcatcgtgttctgtggagatcaaggatgatgcctgcagaggtgtgtgtgatgac
aatgcaaactgcattacaggacccaagggatcagcagctgcttgcgtgtgtgccgctgga
tacgaggggaatggaaccttctgcaaagagctggatgtgtgcggcaggtctaatggtgga
tgttctgagtttgcagtctgtacaaagctctcaggtggagaaaggacctgcacctgtaag
gcgggatacacgggagacggagtcgtctgcctggaaatcgatggctgtctggtcaacaat
ggtggctgccacagggcagcggactgcatcagaactggacccaatgttacatcctgcaga
tgtcggacgggtttttctggatcagggaagctctgcttccctgtcaacccctgcagaacc
aacaatggtgactgcagtaagtttgcacgctgtgagtacctgggtcagggccggaggaac
tgcacctgcttcagaggccatgtgggggacggcttcgtttgcagaggaaccatcaaggca
gaggtgacccgtcagtcagagaacgccttttttcgccagatgctgtggatgtcaggctac
tctggtctccatgacgatggtgtgtacaccctttttgttccactggagggagccaacaac
caatccactgttgaagagtggaggaggtccggtcgtctggagcatctaattctttaccac
ttggttccgtgtgaaattctaaccttaagtgatctcaaaaccagtgtacgggcaatctct
gtgtcaggatacacactgtacttcagccagcagcagggttcagtctggatcaacaatgtg
tcgaggatagtgaagagtgattacactgcaagtaatggagtcattcaccacatagacacg
atgctgactccctacaagctcaaggacagaccacagcttcagcctaaaatgatgaacttc
agcacagcagcaaccgtatatggctacagacgcttctatcaacttattaaggatgctggt
ttgcttccagtgctccagatgtccatccatcagccattcaccttcttttggccgactgac
aaagcccttaactccctgcctactgaaaggcaacgctggctctatagccccaaccaccag
gaccagctcactgccaccatcaaagctcacatcatacgaaactccaagctgacagacatt
ggtcagccaaggaaatcttcgacatatcggaccatgcacgggtcactcgtcaagttaagc
tgcgacaggacgctggtgggtggagttttacttaatgacaactcagccaggctggtggag
cgctacatggaatttaaagaaggtctggcattcggcatcgaccagctgctggagccacct
ggactgggagcattctgcgatgcagtgaagaacagaaccacctatgggcgttgtggaagc
tgcttcttccctccaccttgccccagctcatctatttacttgggaaacacaatgctttgt
tcaagatatcgtccaagatacacatacctagacctggaacctggaattagcagacggggc
tgtatgagagtttgtcaggttccttcctgggtctcacagtgctgcaaaaaccactacagc
agagactgtaaagtgtgtccaggaggagtggaagctccctgtagtcgccatggtgactgt
gatgatggtctcacaggttcgggagtctgtaggtgctacaaaggcttcagaggacattcc
tgtcaactctgtgccagtggctactatggcgtcaactgcacagcctgcagctgtgggacc
ggacgctgtgatgagggcgtggatgggactggacaatgtatttgtgagtctggatgggaa
ggagatcggtgccagaaccacatcgactcggtcccggagaactgcagacaatgccacgct
caagctacatgtgtgtctcacgttggttgtcagtgtaaaccaggattcgaggggaatggg
actttctgcagcctgatgccgcccccagacctctgctccgagtacaacggtggctgtgac
ctcagtgcagactgcaaccagacaggactgctcgtgaactgtacctgccgcagcggttac
cgtggagatggcttctcgtgtgagcctatcaacagatgtgttgaagagcaaaatggtggc
tgcagtgactttgcctcctgcaagttcactggtcctaacgagagagaatgtgaatgtctg
ccggggtttgttggtaatggagtccaatgtctggagagggcggtgccccccacggatcgc
tgccttgaagacaacggaggttgtgacattgtggccacctgcaaggaccttcattaccat
gccaacacagccggagtgtttcacatccgctccacggaggggaagtacaagatgaatctg
agtcaggctgaagctgcctgccaggttgagggtgccacgctggctactttcaaacagctg
ggagatgcacagcagcttgggatgcatctatgtgtcgccggttggatggagggtgggaaa
gttgggtatccgactcgctttccttcggctaaatgtggcgacaatcacgtgggtctggtc
atctacaaagacccagtggaccagggcagcaagttcgatgcctactgctacaggctcagt
gatgtctcgtgctcatgtcctgatggttacgttggaaacggggacttctgtaacagcgtc
ctgaccagtgtcctagctgccaacaacgacttctccatcttttacaagttgctgttggac
cacagtggctcgtcctcagaaggaaagcagcttgttgaagttttgactcacaggaagtcg
gacatcacgctgtttgtccctcttaactctggcttcacaccaaaccagactctgtcaaga
agagatctggagtatcacatctcagccaatcacagcagacgacttttcaaagacctgaga
aatcaggaagtcattgcgtcaaggcttgggttaaacctgacagttacgcactgcaacgag
agctgtacgctagtgaaccagcggctgctgctggaatgggacattcctgctgtgaacggg
atcatccacgtcatcgaggcgccactgactgctccctctctaccgatggaccctggtgct
tctcgacgccatgtccaagccaccagcaccgtgttggccatattagtaatgttgtcggtg
tgtgcattgactgcaattggatattacatctatacaaacaagatggatgtcttccgcttt
cattatttcaaaaatgaagatgaacatactaccagtcccacgttgttctccatccccaac
cctctatacggcggctccaaagcctttgaggaaccgttcggggatacctgtcagggagca
gaacccaaagacctcacaaacaccctggagctggaccagtaa
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integrated database retrieval system