KEGG   Nothobranchius furzeri (turquoise killifish): 107389385Help
Entry
107389385         CDS       T05163                                 

Gene name
hdac4
Definition
(RefSeq) histone deacetylase 4 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    107389385 (hdac4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nfu03036]
    107389385 (hdac4)
Enzymes [BR:nfu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107389385 (hdac4)
Chromosome and associated proteins [BR:nfu03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     107389385 (hdac4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Motif
Other DBs
NCBI-GeneID: 107389385
NCBI-ProteinID: XP_015820997
LinkDB All DBs
Position
sgr14
AA seq 1098 aa AA seqDB search
MLYQTSATKSMSSYTHQVDVSTAALPSQVPPTTTALLPMDLRVVDHPHPHHHQQPPFGLV
SQPHPTPTPSTACPASSESGSGPVIGHQETHLQQELVALKHKQQLQRQLLIAEFQRQHEQ
LSRQHEVQLQEHIKHQQDLLALKHQQELLEHHRKMEQQRHEQQLEKQQREQKLQQLKNKE
RGQESAVASTEVKMRLQEFVLNKKKALAQRNLNHCLLSTPRYWYGKTQHSSLDQSSPPQT
ALSAYNHPVLGAYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLLRRKDGPISTAK
KRPLDVADSACSSAPGSGPSSPNNSSSHIPSENGIPNSSSPGEVALLQRLAMRDGSVSQL
SLYTSPSLPNITLGLPATGPAGAVVSGHQDGESPLALPALQQGIPVTPAFLPTSHLPSYL
APSALDREGPGGGTAGHNALLQHMVLLEQSHGPVVGLGGLPMTSPTVSKLVRGHRPLGRT
QSAPLPQQPCGQTQALQQLVVQQQHQQFLEKHKLFQQQHIINKIMSKPGDQVSPPGSGAA
VPSRHHQSHPEETEEELREHQGLSSSSSTSSSSSVPETGSMRGLVIKQEPLDLQEQEERE
QRERQVEQDFLFNQQALLLEQQRIHQLRNYRASIEAAGLPVSIAVHRPLSRAQSSPASAS
FPIVVPEPPVKHQFTTGLVYDSLMQKHQCICGNATIHPEHAGRIQSIWSRLQETGLRSRC
ECIRGRKASQEELQTVHSEAHVLLYGTSPLRQKLDGSVNSVFVRLPCGGVGVDSDTIWNE
VHSSAAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKL
LQQRLNVSKILIVDWDVHHGNGTQQAFYADPSVLYLSLHRYDDGNFFPGSGAPDEVGSGA
GEGFSVNIAFTGGLEPPMGDAEYLAAFRTLVMPIANEFAPDMVLVSSGFDAVDGHAPPLG
GYKLTAKCFGYLTRQLMALAGGRLVLALEGGHDLTAICDASEACISALLGNELDPISYEV
LQQRPNANAVHSMEKVVEIHGKYWRSLQRSASTLGCSLSEALQRDTEEAETVSAMASLSV
ANKHKRSEEEPMEEEALI
NT seq 3297 nt NT seq  +upstreamnt  +downstreamnt
atgctctatcaaacatcagcaactaaaagtatgtcctcctacactcaccaagtggatgtg
agcacggcagcccttccctcgcaggttccccccaccaccacagccctcctccccatggac
ctgcgcgttgtggaccatcctcacccccaccaccaccagcagccgccctttggcctggtg
tcccagccccaccccacaccgaccccctccacagcttgtcctgcatcttccgagtcgggc
agtggaccggtcatcggccaccaggagacacatctgcagcaggagctggtggccctcaaa
cacaagcagcagctccagaggcagcttctgattgcggagtttcagaggcagcatgagcag
ctgtcgcgacagcatgaagtccagctgcaggagcacattaagcatcaacaggatctactg
gctcttaagcaccaacaagagctgctggagcatcacaggaagatggagcaacagcgtcat
gagcaacagctggagaagcagcagcgggagcagaaacttcagcagctgaagaacaaggag
aggggacaagagagcgccgtggccagcactgaggtaaagatgcgactgcaggagtttgtc
ctgaacaagaagaaagccctggctcagcgaaacctaaaccactgcctgcttagcacgccc
cgctactggtatgggaaaacgcagcacagctctttagaccagagctcaccccctcagacg
gcactatcagcatacaaccatccagttctgggtgcatatgactctaaagacgacttccca
ctacgaaaaactgcgtccgaacccaacctgaagcttcgctcccggctaaaacagaaggtg
acggagcgccggagcagcccacttctccgcaggaaggacggacccatcagcactgccaag
aagcgacccctggatgtagctgactctgcatgcagcagtgcaccaggctcaggtcccagt
tctcccaacaacagctccagccacatccccagtgagaatgggatccccaactccagcagc
ccaggagaggtcgccctccttcagaggttggctatgcgggacggttcggttagccagctg
tcactctacacgtctccttctctgcccaacatcaccctgggactgccagccactggtcct
gccggcgctgtggtatcgggacaccaagatggcgagagtcctctggcgctgcctgcgtta
cagcagggcattccagtgacccctgcttttcttcctacttcccacctgccttcatacttg
gcaccttcagcactggacagggaggggcctggagggggcacagctggtcacaacgccctc
cttcagcacatggtactactggagcagagccacggtccagtggtgggtctgggtggctta
cccatgacgtcaccaactgtctccaagctggttcgaggccaccgccccctgggaagaacc
cagtcggctcctctgccccagcagccgtgtgggcagacccaggccctgcagcagctggtg
gtccagcagcaacaccagcagttcctggaaaagcacaaactattccagcagcagcacatc
atcaacaagatcatgtccaagcccggcgatcaggtgtcgcctccaggatctggtgcagcg
gtaccaagtcggcatcatcagagtcacccagaggagacggaagaggagctcagggagcac
caagggctgtcctcatcctcctccacatcctcctcttcatcagtgccagagacagggtcc
atgagggggctggtcatcaagcaggaacctcttgacctccaagagcaagaggaaagggaa
cagagggagaggcaggtggagcaggacttcctgttcaatcagcaggcgttgctcttggag
cagcagcgcatccatcagttgaggaactacagagcctccatagaagctgcagggttaccc
gtcagcatcgctgtccaccgtcctctgtcccgggctcagtcgtctccagcctccgcttcc
ttccccatcgtagtcccggagccgcctgtgaagcatcagtttactacaggtctggtgtat
gactctttgatgcagaagcaccagtgcatctgcggcaacgccaccatccatccagagcac
gccggtcgtattcagagcatctggtcccggctgcaggaaacgggcctccggtctcggtgt
gagtgtatccgtggccggaaggcctcgcaggaggagttacagacggttcactcggaggct
cacgtcctactgtacggcaccagcccactgaggcagaagctggacggttcggtgaactcc
gtgtttgtgaggttgccgtgcggcggcgtcggggtggacagcgacacgatttggaacgag
gtccattcgtccgctgctgctcgtctggctgtcggctctgtggtggagctcgttttcaaa
gtagcatcgggagagctgaagaatggcttcgctgtagttcgcccacctggacaccacgct
gaggagagcacacccatgggcttctgttatttcaattctgtcgccgtagcagccaagctc
ctgcagcagaggctgaacgtcagtaagatcctcatcgtggactgggatgtccatcatggt
aatggcacccagcaggccttctacgccgacccgagtgtcctctacttgtccctgcatcgc
tacgacgacgggaacttcttcccaggcagcggggcacctgacgaggtgggcagtggtgca
ggtgagggcttcagcgtgaacatagcgttcaccggaggcctggaaccgcccatgggggac
gcggagtatctcgctgcattcaggacgttggtcatgcccatcgccaatgagtttgcccca
gatatggttctggtgtcgtctggctttgacgcggtggacggacacgccccgcccctggga
ggatacaaactgacagccaaatgctttggctacctgaccaggcagctgatggcgctggcg
ggcggtcgcttggtgctcgccctggaggggggtcacgacctcacggccatatgtgacgcc
tctgaagcctgcatctctgctctgctcggcaatgagttggaccctatttcatatgaggtg
cttcaacagagaccaaacgccaacgctgttcactcgatggagaaagtcgtcgaaattcac
ggtaaatactggcgttcacttcaacgctccgcctccacacttggctgttcgttgagcgaa
gcgctgcagcgggacaccgaggaggccgagaccgtctccgctatggcttcgctgtccgtc
gctaacaaacacaaaagaagtgaagaggaaccaatggaagaagaggctttgatttaa

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